Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu1g00722 ATGGGTTGGATTTTAGTGTCATACTTGATCATCTTCCAATCTTTGCTTCTTCATTTTTCTTCATACCATTGTTTGTCGTGCAACCCTGATGACAAATCTGGCCTGTTGCAATTCAAAAATTCAGTTGCTGTTGTGGGGCTATCAACTTCGTATGGTCCTTGTGGCTTGTATTCTCAAAAAACAGCATCTTGGAACAATGAAACAGATTGTTGCGGGTGGGATGGTGTCGTATGTGACTCTGAGTTAGGTCATGTGATTGGCCTCGACCTTTCCTGCAGTCCTCTTAAAGGTGAGCTACTTGGTCCCAATAGTTCCATTTTCAAGTTAAGCCACCTTCAACAGCTTAACCTACTTTCTGGTGATTTATATCCATCTCCAATACATTCTGCAATTGGTGATCTTGTGAGCCTCACTGATTTAACTTTATATTACCTTAGAATTAGTGGTGATGTTCCCTCCACAATCTCTCACTTGTCAAAATTAGAACATCTTCATCTCACTGTAGCATCTCTTGATTCCACACCGAGACTTGATTCATACACTTGGAACAAACTCATTCCCAACGCCACTAATTTAAGAGAAATTTCTTTACGTGGATTGAACATGTCTTCTGTCGGAGAGAGCTCTTTATCATTGTTAACCAATTTGTCATCCTCTTTGCTTTATCTCGATCTCACAGATACCAAACTCCAAGGGAAATGGCCAACTGACATCTTCCGTTTACCCAATCTCCAAGAAATACGTATCTTAACGAATAAAAACCTGACAGGTGAACTTCCAACCTCCAACTGGACTTCTTCACTAAAAACCATGTTTATTTATCAAACTAATTTCTCAGGAAACATTCCTGATTCCATAGCCCAGTTGAAGTCTCTTAAATCACTGTCTCTTTTTGAATCCAATTTTGATGGATTTATTCCACCATCATTGTTTGATCTTACTCACCTTTATCTCTTACATTTATCAGATAATAAATTAATTGGCCCAATTCCAACCCAAATCACCAAACTCTCTGAACTATCGATCCTAGGTTTGAGTGGTAACATGTTAAACGGATCAATTCCTCTTTGGTGTTATTCTTTGCCATCTTTATCCATCTTGAGTCTTAGTAACAATCAACTCACGGGGTCAATTGGTGAGTTCTCAACTAATTCTTTGCAACTTTTGAAACTTTCTAATAATAAACTGCAGGGCAACTTTCCAAATTCAATATTTCAATTCCAAAATCTCACTCATTTGAATTTGTCATCATTGAACTTGAATGGTGTTGTGGACTTTCACCGATTTTCAAACCTCACAAAACTAGAGTATTTGGATCTTTCTCACAATAGTTTTCTCTCTGTAAACTTTGAAAATAATTTTGATTACATCTTACTTCTCAACCTTCAATACTTAGATTTATCTTCGTGTAACGTAAGTAGTTTTCCAAATTTCTTGGCACCACATTTGAAAGATTTAGATATTTCTCATAACATAATTCATGGAAGCTTTCCCGAAAGCTTTCAAAAGAACCTCATGCTCTCCTGGAAGGAAATTAGTTACATTGATCTCAGTTTCAACAATTTGCAAGGAGATCTTCCTATTCTACCAAATGGCATTCAATACTTTTTAGTGTCAAATAATGAACTGAGTGGGGACATTTCTTTAGCATTTTGCAATGCAAGAATACTTTATTTAATCAACTTGGCTCACAACAACTTGACAGGCCTTATTCCAAAATGCTTGGGAACATTTCCTTTTCTTTGGGCATTAGATTTGCAAGACAACAACCTTTACGGAAGCATACCCGATAACTTTTCTGAAGGAAATGTCTTTGAGACTCTAAAGTTGAATGGAAATCACTTGAAGGGGCCGTTGCCACAGACTTTGAGTCACTGTACAAAGCTTGAAGTTTTGGACCTTAGAAACAATGACATAGAGGATACATTTCCCTATTGGTTAGAAACTTTGCCAACTTTACAGGTACTCAGTTTGCAGTCAAATAAATTTTATGGTAACATCACTTCTTTCGGCACCAAACCTTCATTTCCCAAATTGAAGATTTTTGACATCTCCAATAACAACTTTACCGGACCCTTGCCAACATCATATATCGTCAACTTTCAAGAAATGATGAATGTGAGCCAAACTGATTCGATATATTTGGACAACCATCCTATATATAATGATTCACTAGTGATTGTGATGAAAGGGTCACAGAGGGAACTCACGAGGATATTGACTGCTTTGACACTCATTGATTTGTCAAATAATATGTTTGAAGGAGAAATTCCAAAAGCCATTGGAGAGTTGAAGTCTCTAATAGGGCTTAATCTTTCACACAATAAAATTACTGGTACCATTCCACTATCATTGGGTAAATTAACAAAGTTGGAATGGTTGGACCTCTCATGGAACAAATTGAAGGGTGAGATTCCCATGACTCTTACAAATTTGAATTTTCTTTCTGTCTTGAACCTTTCACAAAATCAATTGGAGGGAATGATACCTACGAGTCCACACTTTGACACATTTGAAAATATTTCCTATGTTGGAAATCCAATGTTGTGTGGAAAGCCCTTGTCAAGATCTTGCAATGGGAATAAAGAGAGGTCACAAGGTTCAACACTTGATAAAGAAGACTCAGGATTTGGGTGGAAAGCCGTTGTAATCGGGTATGCATGTGGGATGATCTTTGGAATAATATTGGGTTATAATGTATTCTTTGCTGGAAAACCTCAATGGTTTGCAAGACAAGTTGAAGTTGTGTTTAATATGAGACTGCCCAGAACAAACAATTCAAAGCGTGTAATTCGTTTGGGAAGAAAAAATTAG 2814 0.3692 MGWILVSYLIIFQSLLLHFSSYHCLSCNPDDKSGLLQFKNSVAVVGLSTSYGPCGLYSQKTASWNNETDCCGWDGVVCDSELGHVIGLDLSCSPLKGELLGPNSSIFKLSHLQQLNLLSGDLYPSPIHSAIGDLVSLTDLTLYYLRISGDVPSTISHLSKLEHLHLTVASLDSTPRLDSYTWNKLIPNATNLREISLRGLNMSSVGESSLSLLTNLSSSLLYLDLTDTKLQGKWPTDIFRLPNLQEIRILTNKNLTGELPTSNWTSSLKTMFIYQTNFSGNIPDSIAQLKSLKSLSLFESNFDGFIPPSLFDLTHLYLLHLSDNKLIGPIPTQITKLSELSILGLSGNMLNGSIPLWCYSLPSLSILSLSNNQLTGSIGEFSTNSLQLLKLSNNKLQGNFPNSIFQFQNLTHLNLSSLNLNGVVDFHRFSNLTKLEYLDLSHNSFLSVNFENNFDYILLLNLQYLDLSSCNVSSFPNFLAPHLKDLDISHNIIHGSFPESFQKNLMLSWKEISYIDLSFNNLQGDLPILPNGIQYFLVSNNELSGDISLAFCNARILYLINLAHNNLTGLIPKCLGTFPFLWALDLQDNNLYGSIPDNFSEGNVFETLKLNGNHLKGPLPQTLSHCTKLEVLDLRNNDIEDTFPYWLETLPTLQVLSLQSNKFYGNITSFGTKPSFPKLKIFDISNNNFTGPLPTSYIVNFQEMMNVSQTDSIYLDNHPIYNDSLVIVMKGSQRELTRILTALTLIDLSNNMFEGEIPKAIGELKSLIGLNLSHNKITGTIPLSLGKLTKLEWLDLSWNKLKGEIPMTLTNLNFLSVLNLSQNQLEGMIPTSPHFDTFENISYVGNPMLCGKPLSRSCNGNKERSQGSTLDKEDSGFGWKAVVIGYACGMIFGIILGYNVFFAGKPQWFARQVEVVFNMRLPRTNNSKRVIRLGRKN 937
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu1g00722 937 SUPERFAMILY L domain-like 63 261 - -
Vimu1g00722 937 Pfam Leucine rich repeat 742 801 IPR001611 GO:0005515
Vimu1g00722 937 Pfam Leucine rich repeat 606 663 IPR001611 GO:0005515
Vimu1g00722 937 FunFam LRR receptor-like serine/threonine-protein kinase GSO1 263 530 - -
Vimu1g00722 937 Pfam Leucine rich repeat N-terminal domain 29 79 IPR013210 -
Vimu1g00722 937 Gene3D Ribonuclease Inhibitor 123 406 IPR032675 -
Vimu1g00722 937 Pfam Leucine Rich Repeat 482 503 IPR001611 GO:0005515
Vimu1g00722 937 PANTHER LEUCINE-RICH REPEAT RECEPTOR PROTEIN KINASE EMS1-LIKE-RELATED 26 859 IPR046956 -
Vimu1g00722 937 SUPERFAMILY L domain-like 509 844 - -
Vimu1g00722 937 SMART LRR_typ_2 740 764 IPR003591 -
Vimu1g00722 937 SMART LRR_typ_2 812 835 IPR003591 -
Vimu1g00722 937 SMART LRR_typ_2 432 452 IPR003591 -
Vimu1g00722 937 SMART LRR_typ_2 361 384 IPR003591 -
Vimu1g00722 937 SMART LRR_typ_2 788 811 IPR003591 -
Vimu1g00722 937 SMART LRR_typ_2 313 337 IPR003591 -
Vimu1g00722 937 SMART LRR_typ_2 459 482 IPR003591 -
Vimu1g00722 937 SMART LRR_typ_2 578 602 IPR003591 -
Vimu1g00722 937 SUPERFAMILY RNI-like 218 524 - -
Vimu1g00722 937 FunFam Tyrosine-sulfated glycopeptide receptor 1 607 863 - -
Vimu1g00722 937 Gene3D Ribonuclease Inhibitor 23 122 IPR032675 -
Vimu1g00722 937 Gene3D Ribonuclease Inhibitor 429 867 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu1g00722 Vimu-Chr1 4682973 4685786 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu1g00722 6 911 Receptor kinase-like Gene Family AT1G47890 36.159 1.25e-146 459
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu1g00722 - - vum:124840047 1286.55
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu1g00722 1 4682973 4685786 Vimu1g00722 1 4682973 4685786 ECH