Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu1g00463 ATGGCGAAGAAGGAAGCGTGGCTGCTGCTGCTCCTCCTGATATCGGCGTCCGTGCCGGGCCTCCAAGTTTGGGCCCTGAAAACGCCGTTTCACCTGCGAGACGTGCTTCCTCTGCTGCCGAGGCATGTATCGTGGCCCATCATGACCCGCCTCCACAGCGCCGTCGATATCCTCCCCGTCTTCGTCGGCGCCGCTTCTTCTCCGGACAACGCTCTCGAGTGGAAGGGCGCCTGCTTCTACGAGAACAAAGCGTGGATGGTGTTTCACAACAACAGCCAAACTGAATACGGCGGCGGAACCCTTCACATTAAGGTTGCTTTCTCTTCTGTTTCAATCTCAAGTTTTGGAAATCTGGTCCCTGTACCTGAAAACTCCACCTTTGTCCCCTGCTTGTTAGATTTTTCGGTTAGCAATGCTCACAGTTGGACGTGCATGGATCTTTATATTTTTGCTACCCCATATCGTGTAACATGGGATTACTATTTCCTGGCCCGGGAGCATACACTTGAGATCAAAGCATGGGAAGGAAAAGCTGAGTATGATTATGTGAAAAACCATGGATTATCAATTTTTCTCTTGCAAGCTGGGATGTTGGGGACCCTTCAAGCACTTTGGGAGGTGTTCCCTCTATTTTCAAATACTGGATGGGGCGAGAACTCCAATATTAATTTTTTGGAGAAACATATGGGATCTTCTTTTGAAGTGCGCCCTCAGCCTTGGGTTACAAATGTCAGTGCTGATGACATCCATTCTGGAGATTTCCTTGCTGTTTCGAAAATACGAGGTCGGTGGGGTGCTTTTGAGACTCTAGAGAAGTGGGTTAGTGGAGCTTATGCTGGTCACACTGCTGTTTGCCTAAGAGACCCCAATGGGAAGCTTTGGGTTGGAGAGTCCGGACACGAAGATGAAAAGGGAGAAGATATAATTGCTTTGATGCCATGGGAAGAATGGTGGGACTTTGAACTGACTAAAGATGATTCCAATCCCCACATTGCATTGCTTCCGTTGCACCCTGACTTGCGTGCCAGGTTTAATGAGTCTGCCGCATGGGAGTATGCACTGAGCATGATAGGAAAACCTTATGGTTACCATAACATGATCTTCAGTTGGATAGACACTTTAAATGGAAACTATCCGCCGCCCTTGGATGCTAACGTGGTTGCTTGCGTTATGACAATTTGGAATCAACTCCAACCTGAGTATGCAGCAAATATGTGGAATGAAGCCCTGAACAAAAGACTTGGAACTGAAGGACTTGACCTTCCAGAAGTTTTAGTAGAAGTTGAAAAGCGTGGATCATCTTTTGATGAACTGCTGACAATTCCTGAACAGGATGATTGGGTCTATAGTGACGGGAGGTCAACATCTTGCATTGCTTTTATACTTGAGATGTACAAGGAGGCAGGGTTGTTCGATCCAATTGCTAGTTCTGTTCAAGTGACAGAATTTACGATAAAAGATGCTTACATTCTCAATTTTTTTGAGAACAATTCTAGTCGCTTACCAAAATGGTGCAATGATGGAGACACTGTGAAGCTTCCTTATTGTCAAATTAAAGGCAAGTATCGAATGGAATTACCTGGATACAACACCATGCAACCATACTCTCATATGAATGAAAGGTGCCCGTCTCTTCCTCCTAAGTATTCCAGAACCAAGGATTGCTAG 1668 0.4604 MAKKEAWLLLLLLISASVPGLQVWALKTPFHLRDVLPLLPRHVSWPIMTRLHSAVDILPVFVGAASSPDNALEWKGACFYENKAWMVFHNNSQTEYGGGTLHIKVAFSSVSISSFGNLVPVPENSTFVPCLLDFSVSNAHSWTCMDLYIFATPYRVTWDYYFLAREHTLEIKAWEGKAEYDYVKNHGLSIFLLQAGMLGTLQALWEVFPLFSNTGWGENSNINFLEKHMGSSFEVRPQPWVTNVSADDIHSGDFLAVSKIRGRWGAFETLEKWVSGAYAGHTAVCLRDPNGKLWVGESGHEDEKGEDIIALMPWEEWWDFELTKDDSNPHIALLPLHPDLRARFNESAAWEYALSMIGKPYGYHNMIFSWIDTLNGNYPPPLDANVVACVMTIWNQLQPEYAANMWNEALNKRLGTEGLDLPEVLVEVEKRGSSFDELLTIPEQDDWVYSDGRSTSCIAFILEMYKEAGLFDPIASSVQVTEFTIKDAYILNFFENNSSRLPKWCNDGDTVKLPYCQIKGKYRMELPGYNTMQPYSHMNERCPSLPPKYSRTKDC 555
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu1g00463 555 Gene3D endopeptidase domain like (from Nostoc punctiforme) 248 378 - -
Vimu1g00463 555 PANTHER OS01G0793500 PROTEIN 12 555 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu1g00463 Vimu-Chr1 2810791 2816612 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu1g00463 - - gmx:100796964 991.875
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu1g00463 1 2810791 2816612 Vimu1g00463 1 2810791 2816612 ECH