Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu1g00460 ATGGTTTTTCTTGTTACCCAAATCCAAACCACCCCCTGGTTCAAGCTCAACCTTTCACACGGTCACAAGCTCCTTCAGCGGAGAGTCACCAAGATTTCGATGTCGACAACTCAGGGCAATTCTAAAAGACCCATTTGCCCGTCGTGTTCCAAACCCACACGAACGTGTCTCTGCTCTCGAATCCTCACACCGTGTGTCCAAAATTCCGTCCACGTAACCATTCTGCAGCACGCTCTCGAGCGTAAGCACCCCCTCAATTCTACCAGAATCGCTAGATTGGGCCTCAAGAATCTCACCGTTGCAACTGTTTCTGATGTTAATTTCCACGCCCGGTTCCAGATTCGCTTGTTGGATCCGAATTGCCAAACGGGTCTTGCTGGAAACGTGATGAATGTACTCCTTTCTCGGCCGTATTGCGAATTTGGAGACACCCAGAAACTACTTTCTGAGAAAAACTCTAACTTGAGCGATTCTGATAATGCCGAAAAATGTGGTTTGAGAAATGATCGTGGATGTTTTCTGGATTCTCCCACTCTTGCTGAAGTTGGGACTCAAGTGAGTACCACTGATGGTTCAGTGGTGAACGATGAAGTTGAGAAAAACTTTGTCCCTCCAAATTGTGGCTTAACTAGAGGTGTGCATGAACATAGTGGTAGGCTTGCTATTAATGTTGCCATTGGCAAATATGGTGCTATTAGCTCTATGTCTCATATTTGGATAGCACAGGCACAATGTCAATCCCCCAAGTTAAGCTTTGACAATATTTTGGCTTATCCCGAAGCTTCTGAAGCACTCTCAGAAGGGTTTTTGGTGAAGAAATTTCAAAGAAAGCAACTGAATGGGGATGCAGACTTGGAAGAAGAATGTGAAGAGTTTGAGCTGGAGGTTCGTCCTGGATCAGTGCTATTATTTCCCTCCGATAAAGCTGTGAATATTAGTGACCTAGATGCTATTGGTTTTCAGGTGAAGAACTTGATTGTTTTGGATGGAACATGGGCTAAGGCGAAAAGAATTTACAACGAAAATCCTTGGTTGGACGTTTTGCCCCATGTGAAGTTAGAAGTGAATGAGGCTAGCTTATATAGTGACGTGAGACATCAGCCTAAAGCTGGTTATTTGTCTACTATTGAGAGTATTGTATTTGCCTTGAAGGCAGTTGGGGAGAATCAAGAGGATTTGGATGGTCTCTTGGATACTTTCGAGTCCATGGTTGGAGACCAGAGACGCTGTAAAGAAGAGAGACTGAGCAAACACTTCTCCAGTTGA 1266 0.4447 MVFLVTQIQTTPWFKLNLSHGHKLLQRRVTKISMSTTQGNSKRPICPSCSKPTRTCLCSRILTPCVQNSVHVTILQHALERKHPLNSTRIARLGLKNLTVATVSDVNFHARFQIRLLDPNCQTGLAGNVMNVLLSRPYCEFGDTQKLLSEKNSNLSDSDNAEKCGLRNDRGCFLDSPTLAEVGTQVSTTDGSVVNDEVEKNFVPPNCGLTRGVHEHSGRLAINVAIGKYGAISSMSHIWIAQAQCQSPKLSFDNILAYPEASEALSEGFLVKKFQRKQLNGDADLEEECEEFELEVRPGSVLLFPSDKAVNISDLDAIGFQVKNLIVLDGTWAKAKRIYNENPWLDVLPHVKLEVNEASLYSDVRHQPKAGYLSTIESIVFALKAVGENQEDLDGLLDTFESMVGDQRRCKEERLSKHFSS 421
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu1g00460 421 Pfam DTW domain 43 408 IPR005636 -
Vimu1g00460 421 SMART DTW_2a 42 412 IPR005636 -
Vimu1g00460 421 PANTHER UNCHARACTERIZED 34 417 IPR039262 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu1g00460 - - vra:106765017 821.231
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu1g00460 1 2797281 2798546 Vimu1g00460 1 2797281 2798546 ECH