Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu1g00442 ATGGGAGATAAATATAGTCTAGGCAGGAAGCACAGTGGGATATGGAATTCGTTGAGAGATGGAGATTTTGATGAAGAAGAAATTTGGGATGTTATTAAGAACAGAAGTGATTATGGTTCTTCTGGGGTTCGCAAGTTCAAAGAGAAGGATCAGTCCTCTGCTGTTCCTGTTCCTGGTAGGCCTAGTGCAGCCAGAATGGTGCCAAGATCTAGCAATAGCAGTAACAGTAGCAGTGGTAATTCCTCCGATGAAGCCAAGGTTCTTCAGCAATCAGCACCTGTCAAAATTCCTGACTGGTCAAAAATTTATACGACTAACCCCCCCAAGAATAGTACTTCAAGGTTTGATGCTGATTATGATGGTGAAGATGATTGTGCTGTTAACTATGGTGGGGATAGTGACGAGGATGGAGAGGAAAATGATGAGCCTGATTCAAAGCTTCCTCCACATGAGTTTATTGCCAGAAGGCTTGCAAGGAGTCAGATATCCTCATTTTCTGTTCTAGAAGGTGCTGGGAGAACCCTCAAAGGTAGGGATCTTAGCAAAGTGAGGAATGCTGTTCTCTCAAAAACTGGTTTCCTTGAATCACTATAA 594 0.4293 MGDKYSLGRKHSGIWNSLRDGDFDEEEIWDVIKNRSDYGSSGVRKFKEKDQSSAVPVPGRPSAARMVPRSSNSSNSSSGNSSDEAKVLQQSAPVKIPDWSKIYTTNPPKNSTSRFDADYDGEDDCAVNYGGDSDEDGEENDEPDSKLPPHEFIARRLARSQISSFSVLEGAGRTLKGRDLSKVRNAVLSKTGFLESL 197
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu1g00442 197 MobiDBLite consensus disorder prediction 122 142 - -
Vimu1g00442 197 MobiDBLite consensus disorder prediction 37 149 - -
Vimu1g00442 197 Pfam Senescence regulator 22 195 IPR007608 -
Vimu1g00442 197 PANTHER EXPRESSED PROTEIN 16 195 - -
Vimu1g00442 197 MobiDBLite consensus disorder prediction 66 88 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu1g00442 Vimu-Chr1 2688401 2688994 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu1g00442 - - gmx:100796494 297.36
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu2g02524 2 21218370 21220738 Vimu1g00442 1 2688401 2688994 ECH
Vimu1g00442 1 2688401 2688994 Vimu1g00442 1 2688401 2688994 ECH
Vimu2g02524 2 21218370 21220738 Vimu1g00442 1 2688401 2688994 PCT