Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu1g00371 ATGGAAAGAAGCAAATGTATGGAAATGGAAGAAGAAATGAAGAACATGATCAAGGTATGGGTTTCAGTCCTAATCTCACTTTCTTACTGCTATTTCATTTCTTCAAAGCTACCCAAAGGAATGTTCAGATTTCTGTCACTCTCACCTGTGTTGTACCAATTCTCCATGCTACCTCTTCAATTCACCACTGTCCTACCGACAGGTGTCACTGCCTTGTTCATCACTTGGCTCACCAACTCCAAACTTCTCCTCTTCGCTTTCCATTTGGGACCTCTTCCTTCAAACTCCAACTCCCTCCTTCGCTTCATCTCCTTTGCATCTCTCCCAATCAGACAAACCCTAAAATCCAAATCAAATTCAAAACTCACTTCTCATCCCATTTTTCTCCCAATCAAGACCTTCCTTTTTGTACTCTTTCTCTTACCCATCAAACAAAAACTTCACCCTGCACTTGTTCTTTCCGGCTATTGCGCCATTGTGTATCTTCTTGTCGATATTGTTATGGGACTCTGCAACATTCTCGTCGACGCCACGTTTTCCGTTGAGCTACAGTTACCGTCCGATGACCCTTATCTCTCAACCTCGTTGCGTGATTTCTGGGGGAGAAGGTGGAACCTCATAGTAACGCATACGCTGCGACACACCGTATACAATCCTGTCAGATCGCTACTGAGAAATACCGTATTGGGCCCCCCGTGGGCCTCGGTGTTCGGCGTCATGGCATCTTTCTTGGTGTCTGGGTTGATGCACGAGCTTCTATTCTACTACGTCACACGTGTCTCTCCCACGTGGGAGGTTACGTCCTTCTTTCTGCTCCACGGGGTTTGCGTGGTTGCGGAGTTTGGTGCGGTGAAGTGGTTGGGCCATAAATGTAGACTGCATTGGGCCGTTTCCGGGCCCATTACTGTGGGGTTTGTGATCACTACCGCCGCATGGCTCTTCTTTCCACCGTTGATGCGTACTGGCACGGGCGAGAGATCCATCAAGGAGTTCAACGACGTTGTTGAGTGTGTTATGGGAATATTTTACTAG 1032 0.4738 MERSKCMEMEEEMKNMIKVWVSVLISLSYCYFISSKLPKGMFRFLSLSPVLYQFSMLPLQFTTVLPTGVTALFITWLTNSKLLLFAFHLGPLPSNSNSLLRFISFASLPIRQTLKSKSNSKLTSHPIFLPIKTFLFVLFLLPIKQKLHPALVLSGYCAIVYLLVDIVMGLCNILVDATFSVELQLPSDDPYLSTSLRDFWGRRWNLIVTHTLRHTVYNPVRSLLRNTVLGPPWASVFGVMASFLVSGLMHELLFYYVTRVSPTWEVTSFFLLHGVCVVAEFGAVKWLGHKCRLHWAVSGPITVGFVITTAAWLFFPPLMRTGTGERSIKEFNDVVECVMGIFY 343
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu1g00371 343 PANTHER LONG-CHAIN-ALCOHOL O-FATTY-ACYLTRANSFERASE 3-RELATED 9 336 IPR044851 GO:0006629|GO:0008374
Vimu1g00371 343 Pfam Membrane bound O-acyl transferase family 189 271 IPR032805 -
Vimu1g00371 343 PIRSF Wax_synthase 9 343 IPR017088 GO:0008374
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu1g00371 Vimu-Chr1 2203656 2204687 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu1g00371 9 338 Miscellaneous Gene Families AT5G55340 43.072 3.12e-84 256
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu1g00371 - - gmx:100809798 509.605
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu1g00371 1 2203656 2204687 Vimu1g00371 1 2203656 2204687 ECH
Vimu2g02464 2 20406460 20407497 Vimu1g00371 1 2203656 2204687 PCT