Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu1g00354 ATGGCGACGCCAGATTCTGACGCTACTATTCAGCCTCAAGATTCTGATTCTCTATCCAATCCTAGTCCTCCCAACGCTCTCGTCCCCGCCGCTCCTGCCGTTTGCCTCCTCCGCTTCGCAACCGACTCAGCCGGTGGCGCTCTCATGGGCTCTGTCTTTGGATACGGTGCTGGATTGTTTAAGAAGAAAGGTTTTAAAGGCTCCTTTGTAGAAGCGGGGTCTTATGCAAAGACATTTGCAGTTTTGTCTGGAGTTCATAGTTTGGTTGTTTGCATCTTGAAAAGACTTAGAGGAAAGGATGATGTCATTAATGCGGGGGTAGCTGGATGTTGCACTGGTCTTGCTCTAAGTTTTCCAGGTGCTCCACAAGCTCTTTTGCAGAGCTGTCTTACCTTTGGGGCATTTTCTTTTATTATGGAAGGGCTAAACAAGCAGCAACCAGCACTTGCAGTTCCCATGTCCTTGAAAAAACAATCTGTGCAATACAGTGCTCGTCCTCCCCTGGCACTCTCCCTTCAACTCCCTCTTCCAGAAGAACTAAAAGAAGCCTTCTCTTTTTTCTCCGAGTCTCTGAAGCAGCGCAGCAAGGGATCTTACCCAACATCTCAATAA 612 0.4804 MATPDSDATIQPQDSDSLSNPSPPNALVPAAPAVCLLRFATDSAGGALMGSVFGYGAGLFKKKGFKGSFVEAGSYAKTFAVLSGVHSLVVCILKRLRGKDDVINAGVAGCCTGLALSFPGAPQALLQSCLTFGAFSFIMEGLNKQQPALAVPMSLKKQSVQYSARPPLALSLQLPLPEELKEAFSFFSESLKQRSKGSYPTSQ 203
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu1g00354 203 MobiDBLite consensus disorder prediction 1 23 - -
Vimu1g00354 203 PANTHER MITOCHONDRIAL IMPORT INNER MEMBRANE TRANSLOCASE SUBUNIT TIM22 17 160 IPR039175 GO:0042721|GO:0045039
Vimu1g00354 203 Pfam Tim17/Tim22/Tim23/Pmp24 family 39 136 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu1g00354 Vimu-Chr1 2086207 2087942 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu1g00354 5 196 Miscellaneous Gene Families AT4G26670 65.803 8.62e-86 250
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu1g00354 K17790 - gmx:100813557 300.827
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu1g00354 1 2086207 2087942 Vimu1g00354 1 2086207 2087942 ECH