Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu1g00297 ATGGCTTGCTCCACCTTCCTCTGCCCCGTAGCTTCTACCTTCTCACAAAAACCACTTCAATCCACCTTTCTGCATTCCTCCGTCAACCCCTCTTTTCTCACACTCAACATTCTTCCAAAGAAATTGAGAAAACCCAATCAACTGAGACGCCTTGTAGTGGCCAAATCCAATGACAGTGATTCTGCCGATGTTCCTGACCGTTTAATTTCCGCACTATGTTACTTTTACCCTTTCTTTGATGGCATACAGTATGGAAAGTATGTAATCACTCAGTTCTACCCTGTTCAGGCCATTATTCAACCACTGGTCCCTGCAATAAGAGTTTTCAAGAGCTTCCCCTTTAATGGGTTTCTAGTGTTTTTGACCCTTTATTTTGTTGTGGTGAGAAACCCCAATTTCAGTAGGTATGTGAGGTTCAACACTATGCAAGCCATTGTCCTTGATGTGCTGTTGATTTTCCCTGACCTCTTGGAAAGAGGGTTTAATCCCAGGGATGGGTTGGGGTTGGATTTGATGATGAGTTTGGATAGCACCGTGTTCTTTTTCCTCTTGGTGTGCTTGATTTATGGTTCTTCTTCGTGCTTGGTGGGTCAAATCCCCAGATTGCCCATTGTTGCTGAGGCAGCTGACAGGCAGGTTCTTTGA 645 0.445 MACSTFLCPVASTFSQKPLQSTFLHSSVNPSFLTLNILPKKLRKPNQLRRLVVAKSNDSDSADVPDRLISALCYFYPFFDGIQYGKYVITQFYPVQAIIQPLVPAIRVFKSFPFNGFLVFLTLYFVVVRNPNFSRYVRFNTMQAIVLDVLLIFPDLLERGFNPRDGLGLDLMMSLDSTVFFFLLVCLIYGSSSCLVGQIPRLPIVAEAADRQVL 214
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu1g00297 214 PANTHER PROTEIN TIC 20-II, CHLOROPLASTIC 21 213 IPR005691 -
Vimu1g00297 214 Pfam Chloroplast import apparatus Tic20-like 67 209 IPR005691 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu1g00297 Vimu-Chr1 1767586 1768230 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu1g00297 - - gmx:100777912 370.933
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu1g00297 1 1767586 1768230 Vimu1g00297 1 1767586 1768230 ECH