Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu1g00283 ATGGGTAGCAACGGATTGAGGTACGAGATCGCACAAAACGCTTACATCAAACTCGTGCTTCACTCCCTCAAACACCCAACCTCCGCCGTCAACGGCATCTTGATCGGTCGCATCTCCCCTTCCAACGACGTCGTCGAGATCGCCGATGCCGTCCCTCTCTTCCACTCTCACATTCCTCTTCTTCCGCAATTGGAGATATCTCTCATTCTGATAGAGGAATATTTTTCTGCGAAAGGGTTGAACATAGTGGGCTATTTTCACGCGAATGAGAGATCTGATGACAGTGAGCTTGGTAGCGTGGCCAAAAATATCGGTGACCACATATGCCGCTACTTTCCTCAAGCCGCAGTTCTATTGTTAGATAACAAGAAGCTTGATGCTTTGAAAAAGAGCAAGGAACGTAGTGCCATAATGCAGCTTTATGTTAGGGATACATCTAAGAACTGGAAGTTGGTTTCCTCTGATGCAAACCGCTTCTCTCTCAAAGAGCCATCGGCAAATGTAGTCTTATTGGACTATATTGCAACTGAGAAGTGGAATGGAATTGTAGATTTTGATGATCATTTGGATGACATTAGCAAGGATTGGCTAAACCCAGAGCTGTTCAACTGA 612 0.4542 MGSNGLRYEIAQNAYIKLVLHSLKHPTSAVNGILIGRISPSNDVVEIADAVPLFHSHIPLLPQLEISLILIEEYFSAKGLNIVGYFHANERSDDSELGSVAKNIGDHICRYFPQAAVLLLDNKKLDALKKSKERSAIMQLYVRDTSKNWKLVSSDANRFSLKEPSANVVLLDYIATEKWNGIVDFDDHLDDISKDWLNPELFN 203
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu1g00283 203 ProSiteProfiles MPN domain profile. 8 139 IPR037518 -
Vimu1g00283 203 PANTHER ER MEMBRANE PROTEIN COMPLEX 6 203 IPR005366 GO:0072546
Vimu1g00283 203 Pfam Uncharacterised protein family (UPF0172) 8 201 IPR005366 GO:0072546
Vimu1g00283 203 CDD MPN_UPF0172 10 198 IPR005366 GO:0072546
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu1g00283 K23569 - gmx:100527135 377.481
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu1g00283 1 1657263 1660375 Vimu1g00283 1 1657263 1660375 ECH