Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu1g00280 ATGGAGCTTTTGGGTTCACTGTGGAGAGGAGGACGAAGGTTTATTAAAAGGAAAGACAGTGATGCTGGTGATACAGGTAAAGCACTGGAAGAGCTCAGAGCTTCACTCTACAATGAGATCCGAACCTCAGAAGGAGCAAAGCGACAACAGCAAAAATATTGTGGACCAGTGGTGGCACTGTCCTTCAACTTTATGGTGGCTGTCGGAATTATCATGGCAAACAAATTGGTGATGGGTAAAGTTGGCTTTAATTTCCCAATTTTTCTCACATTTGTACACTATATCACTGCATGGCTTCTGCTTGCCATTTTCAAGGCACTCTCAGTGCTTCCTGTGTCTCCTCCATCCAAAACAACTCCATTCTCTTCTTTATTTGCACTTGGTGCTGTCATGGCCTTTGCCTCTGGCCTTGCAAACACTAGCCTCCAGTATAACAGTGTTGGTTTCTACCAAATGGCTAAGATTGCTGTCACCCCTACAATTGTTCTTGCGGAGTTCATTCTTTTTAGAAAAACCATTTCTTTTACAAAGGTTTTGGCTTTGGCTGTCGTATCAGCAGGTGTAGCAGTTGCAACTGTTACAGATTTAGAGTTCAATTTATTTGGTGCTCTAATTGCAATTGCATGGATAATCCCAAATCCACCAGGAGTCCTATCCTTCAAGTGGGATGTGAACAATTCAACTGCTGTTTTAGTATCTGCTCTCCTTGGTTTTCTCTTGCAATGGTCAGGGGCATTAGCATTGGGGGCCACTTCTGCTACAACTCATGTTGTTTTAGGACAGTTTAAGACCTGTGTGATTGTGTTGGGAGGGTTCATATTATTCAAGTCAGATCCTGGGGTTGTGAGCATTGGTGGTGCTGTTGTTGCTCTCTCTGGGATGTCAGTCTACACATCATTGAATTTGCAAGGGTCTCAGGAAAATATGCAACAAAGTTTGCCTTCACCGAAGTCAAAATCAACAGGTGATGACAGCACAGATTTGAATGTAAATACTAACGGCAGCACCATTGTCTGA 1017 0.4307 MELLGSLWRGGRRFIKRKDSDAGDTGKALEELRASLYNEIRTSEGAKRQQQKYCGPVVALSFNFMVAVGIIMANKLVMGKVGFNFPIFLTFVHYITAWLLLAIFKALSVLPVSPPSKTTPFSSLFALGAVMAFASGLANTSLQYNSVGFYQMAKIAVTPTIVLAEFILFRKTISFTKVLALAVVSAGVAVATVTDLEFNLFGALIAIAWIIPNPPGVLSFKWDVNNSTAVLVSALLGFLLQWSGALALGATSATTHVVLGQFKTCVIVLGGFILFKSDPGVVSIGGAVVALSGMSVYTSLNLQGSQENMQQSLPSPKSKSTGDDSTDLNVNTNGSTIV 338
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu1g00280 338 Pfam Triose-phosphate Transporter family 64 207 IPR004853 -
Vimu1g00280 338 MobiDBLite consensus disorder prediction 308 338 - -
Vimu1g00280 338 SUPERFAMILY Multidrug resistance efflux transporter EmrE 97 193 - -
Vimu1g00280 338 PANTHER SOLUTE CARRIER FAMILY 35 59 211 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu1g00280 Vimu-Chr1 1642236 1644877 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu1g00280 68 328 Organic Solute Cotransporters AT1G21870 23.077 4.90e-13 67.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu1g00280 - - gmx:100814737 521.161
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu1g00280 1 1642236 1644877 Vimu1g00280 1 1642236 1644877 ECH