Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu1g00271 ATGAACATGGCAGGTTTCGCGGGAAACATGGTGTTCAAAGTCTCGTGCCAGCTTCCTTCTCGCTTTTTTTCAATTTCCCTGAGCATTTGGAAGTCGCCGATTGCGTGCCTGAAGTGCAGAGATTTCAGTTCTTCTCTTTCGGTTAGGTACATTGCTAGTACGTTCCACAGGATGAAACTATCCGAAAATGCTCTGCCAGTGAAAAGTCGGGGATATTGTAGTTTTCCCGATGTTAATGTGCTCAAGATAAATGGTGGAAAAGATGTGCATGCAACAATTGTCCATTGTGAAATTTCTCAAGATGCGAATGAAATTTGCTCTGACTTCTTTGATGACAGTGAACAAGGTTCTTTCGATCAAATTGAAGAGGTTGCAGAGCTGACTATCCATCAAGGAGGAGACTCTGGTGACCAGGATTTGATACAAATTGACAAAATTATTAGTGCTGTTGAGGAATCTGCTGTTAAATTACTTGCTGCTAGGGCACTCACAGCACTTGAGTTGAGAAAGAAATTGCTTGGAAAGAGATTCTCTCCTAATTCAGTGGATGCTGTGATAAACAAGTTCCAGCGAAGAGGGTTGATCAATGATAGGTTGTATGCTGAATCATTTTCTCAGTCAAGATGGTCTTCATCAAGTTGGGGACCAAGGCGGATCAAACATGAAGCACCAGACCAGTGGTTGCTTAAAGGTTCTTCACTTGTGGGCCAAGGCAAGGCCAAAGCACACAAACCTTTCACCACGCAAACCTACAATACTGACTTGCCATATACCTGCTCTGCTATTATTATCCGAGGGAAATACTTTTGTGTGTGTGATGGACTGCTATTGTTGTGGCAGGCACTGTTCAAGAAGGGTGTTAGTCAAGCTGATGCTGAGAAGGCAGTGGAAGTGGTCTTTAAGGACAATGATTGCGCCGAAGATCACAGGTCAGTTATTGGCTTGTCAAAACATTCCTTGGATCATCTTTATACTCAAGTTTCAAAGCAGTGGTTCAGAGGTCCGAATGTTCCCAAGGAGACAAGAAAATCAAGAATCGTTCGGTGGCTTCAGTATCGTGGTTTTGACTGGAATGTCATTAACTTGATGCTAAAGAAATTAGACAGGCAGGACCAGAATTCTCCGTAG 1128 0.4309 MNMAGFAGNMVFKVSCQLPSRFFSISLSIWKSPIACLKCRDFSSSLSVRYIASTFHRMKLSENALPVKSRGYCSFPDVNVLKINGGKDVHATIVHCEISQDANEICSDFFDDSEQGSFDQIEEVAELTIHQGGDSGDQDLIQIDKIISAVEESAVKLLAARALTALELRKKLLGKRFSPNSVDAVINKFQRRGLINDRLYAESFSQSRWSSSSWGPRRIKHEAPDQWLLKGSSLVGQGKAKAHKPFTTQTYNTDLPYTCSAIIIRGKYFCVCDGLLLLWQALFKKGVSQADAEKAVEVVFKDNDCAEDHRSVIGLSKHSLDHLYTQVSKQWFRGPNVPKETRKSRIVRWLQYRGFDWNVINLMLKKLDRQDQNSP 375
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu1g00271 375 Gene3D - 196 223 IPR036388 -
Vimu1g00271 375 Gene3D - 317 374 IPR036388 -
Vimu1g00271 375 Gene3D - 150 194 IPR036388 -
Vimu1g00271 375 PANTHER REGULATORY PROTEIN RECX FAMILY PROTEIN 10 222 IPR003783 GO:0006282
Vimu1g00271 375 Pfam RecX family 175 222 IPR003783 GO:0006282
Vimu1g00271 375 Pfam RecX family 278 366 IPR003783 GO:0006282
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu1g00271 - - gmx:100783629 409.838
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu1g00271 1 1580661 1584358 Vimu1g00271 1 1580661 1584358 ECH