Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu1g00193 ATGAAATTATCATCGTTGAGGCATGCTTTGGTGTTCGTGTTAATTGGGGCATTGTTGAACTTGCAGAGCTCAGAGGGTATTCGATTTGTGATAGACAGGGACGAGTGTTTCTCCCATGATGTCAAGTACGAGGGTGACACTGTTCATGTCTCTTTCGTTGTTATCAAGGCTGATTCTCCCTGGCATTATGGCGACGAAGGTGTCGATCTCGTGGTAAAGGGTCCCTCAGGTGAGCAAATTCAAGATTTTCGGGACAAGACCAGTGACAAGTTTGACTTCGTGGCTCACAAATCAGGTGTTCATAAGTTCTGCTTCACCAACAAGTCTCCTTATCATGAAACTGTCGATTTTGATGTACATGTTGGACACTTCTCTTACTTCGAGCAGCATGCAAAAGATGAGCATTTTACCCCCTTGCTGGAGCAAATAGGAAAGTTGGAAGAAGCTCTATACAACATTCAGTTTGAACAGCATTGGTTAGAGGCTCAGACTGATCGCCAAGCAATAGTGAACGATGCAATGAGCCGAAGAGCAGTACACAAGGCAATTTTTGAATCAGCAGCACTGATTGGGGCTAGTGCGATTCAAGTCTACCTTCTACAGCGATTGTTTGAACGAAAACTGGGTACCTCAAGAGTTTAG 642 0.4439 MKLSSLRHALVFVLIGALLNLQSSEGIRFVIDRDECFSHDVKYEGDTVHVSFVVIKADSPWHYGDEGVDLVVKGPSGEQIQDFRDKTSDKFDFVAHKSGVHKFCFTNKSPYHETVDFDVHVGHFSYFEQHAKDEHFTPLLEQIGKLEEALYNIQFEQHWLEAQTDRQAIVNDAMSRRAVHKAIFESAALIGASAIQVYLLQRLFERKLGTSRV 213
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu1g00193 213 SMART EMP24_GP25L_2 26 205 IPR009038 -
Vimu1g00193 213 PANTHER TRANSMEMBRANE EMP24 DOMAIN-CONTAINING PROTEIN 10 208 IPR015720 -
Vimu1g00193 213 Pfam emp24/gp25L/p24 family/GOLD 34 205 IPR009038 -
Vimu1g00193 213 ProSiteProfiles GOLD domain profile. 34 121 IPR009038 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu1g00193 Vimu-Chr1 1066495 1068584 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu1g00193 - - gsj:114403744 418.313
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu1g00193 1 1066495 1068584 Vimu1g00193 1 1066495 1068584 ECH