Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu11g04916 ATGGCGAATTGGATTTCCTCCAAACTTAAAGCCGCAGAGAGCATTCTCCACCAGGCAAGTCTAACTGAAACAATGCTTCGCATTTTCTTTTCCATTTTTGCCTTTTTGGAATCCCTAGCCATAGGAGTTCTCGATCAACAAGCGGCTGAATCGCTTGGCAAGAACGAGGGTTTTCGATCCGAGGAACTGAACATTGATGCTCCCGCTAAATCAGGGATTGGTGTATCTCTGAAGGATCAATTGAAGAAGAAACCCTTGGAGGGCAGTGATTATGGTGGAAAAATTCGCAGTGATCCTAATTTTAATGGCCTTAAAGCTACAGCCAGTGCACCCAAACTATCTACCAAATCTGGCCCTACCTTAACAAACGATGATTGGACTGAACTCCTTAATGCACCTACAGTTACTCAGTCTATAGCTTCTGCTTCTGGGAGCAATCAGGGTAATGGGGTGCCCGCACCTCGTGTTTTGAGGCAAAATAGTGGTAGGAAGCTGAAGGGTTTGTCTTCATCTTCGTCGGTGTCCGATGTGAGGAGGAATGCAAGAAGTGGCAACAGTGGTCCGAGGTCCTTTCAGAAGTCAGACTATATGAAAGAAGTTAAATTGAGTGGAAAAGCCCTTGATGATGGAAAGGAATCTACATCTTCGACTTCGACAAGGAGGAATTTGGATGTAGAATCAGAGACTGATGGTAAATGGGGTAAAGAACCGAAGTATTCCGACGAGGGCAGTTCTGAGAAGCCTGTGATCGAGGAAAATGGAAAAGAAGAAAATGAGCATCGGTTTAACTATAGGGACACTTCTCCACCAGAATCGTTGCAGGAGGGCGACCAAACTTTGGCTGCAGAAACAATACCATCATTAGGGATTGATAGGGTGCAAGAGCCTAAGATTGTGGTAGATTTTGATGGCAGTCAACTGAGAAGTGCGATAAAAGAAAGGCATGAGCTTAATTCAATCTCTGAGAATTCTATATCTGACGATTTGAAAAGGGGTTCTCCCATGGTTAGTGATGGAGGTTCTGATTCAGATACTGATTCCGGTTCAACATCTGATTCTGAAAGTGAGCATGAGAGGGAGGAAAGGAGAAAGAGGAGGGAAAGGATTCTGGCTGAAAAAGCAGCAGCTAAAGCTATAAACGCTATCAAGGAACGGGAAAATATGGTGGCCAAATTAGAGGGGGAGAAGCAGACTCTAGAGAAAATACTTGAGGAGCGAGCTAAAGAACAAGCACAAGAGGCTTCACAGCTTCAGAGCACTGCAATGGAAACGATGGAAGCTGTTGAGTTAGAAAAGCAGAAACATAATAATACTAGAATGGAATTTCTTGCACGTTTAGCTAAATTGGAGACTGCCAATGCTGATCTTGCAAGATCCCTAGCGGCTGTGCAGTGGAACCTTGAAATTGAGGTTAAACAAGTAGCAGAACTTAGACAGCAGATCTCATCGAAGGAGTTGCTTCATGAAGATCTCAGAAGGAGAATGAAGAATCCTCCTCAAACTGGAGCTTCACAAAATCAACTAGCTTCGAAAGGTGTGGAGTTTGAACGGGAAATTCTTGAGGCAGAGCACTCTTTAATCAATGATAAAGTTACTCAATTGGAGGAAAAGGCAAGAAAGCTGGAAGCTGACATTGAAATAACAAGGAAAGAGATGGAAGAGCCAACAGAAGTTGAAGTTGAGCTCAAGCAAAGGCTTCAACAAATGACTGACCATTTAATACAGAAACAAGCAAAGGTGGAATCACTCTCTTCAGAGAAGGCAAGTCTTATGTTCAGAATCGAGGCCGTGTCAAGGTTGCTGGATGAGAACACGTCAGCATCAGGTTCAACAAATATGAACCGTGCTTCTTCATCCAGTGACTTAGAATCAGGATTATGGGAGCTCTCGAATTCAAAGTTGAACCCTATGCTAAAAGCCAGAATTCATTCTGGCAAGAGACAGCTTGGATCATTACTTCAACAACTAGATCATATTTTTGTGACGGGTGCACTTTTTCTGAAAAGGAACACAACTGCAAAATGGTGGGCTTTGATATATCTTGTTTGCCTTCATTTCTGGGTGTTTTATATTCTTTCATCACATTCTGGCCCGTCAAACGTGGGTAGATCTGGTGCCCAGATCTCATTGGAGAACATTAATAACACTGGAGGAGTTTGA 2160 0.4319 MANWISSKLKAAESILHQASLTETMLRIFFSIFAFLESLAIGVLDQQAAESLGKNEGFRSEELNIDAPAKSGIGVSLKDQLKKKPLEGSDYGGKIRSDPNFNGLKATASAPKLSTKSGPTLTNDDWTELLNAPTVTQSIASASGSNQGNGVPAPRVLRQNSGRKLKGLSSSSSVSDVRRNARSGNSGPRSFQKSDYMKEVKLSGKALDDGKESTSSTSTRRNLDVESETDGKWGKEPKYSDEGSSEKPVIEENGKEENEHRFNYRDTSPPESLQEGDQTLAAETIPSLGIDRVQEPKIVVDFDGSQLRSAIKERHELNSISENSISDDLKRGSPMVSDGGSDSDTDSGSTSDSESEHEREERRKRRERILAEKAAAKAINAIKERENMVAKLEGEKQTLEKILEERAKEQAQEASQLQSTAMETMEAVELEKQKHNNTRMEFLARLAKLETANADLARSLAAVQWNLEIEVKQVAELRQQISSKELLHEDLRRRMKNPPQTGASQNQLASKGVEFEREILEAEHSLINDKVTQLEEKARKLEADIEITRKEMEEPTEVEVELKQRLQQMTDHLIQKQAKVESLSSEKASLMFRIEAVSRLLDENTSASGSTNMNRASSSSDLESGLWELSNSKLNPMLKARIHSGKRQLGSLLQQLDHIFVTGALFLKRNTTAKWWALIYLVCLHFWVFYILSSHSGPSNVGRSGAQISLENINNTGGV 719
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu11g04916 719 MobiDBLite consensus disorder prediction 102 126 - -
Vimu11g04916 719 MobiDBLite consensus disorder prediction 194 208 - -
Vimu11g04916 719 MobiDBLite consensus disorder prediction 140 288 - -
Vimu11g04916 719 MobiDBLite consensus disorder prediction 163 192 - -
Vimu11g04916 719 MobiDBLite consensus disorder prediction 350 368 - -
Vimu11g04916 719 Coils Coil 517 551 - -
Vimu11g04916 719 Coils Coil 474 494 - -
Vimu11g04916 719 MobiDBLite consensus disorder prediction 87 126 - -
Vimu11g04916 719 Coils Coil 375 420 - -
Vimu11g04916 719 MobiDBLite consensus disorder prediction 140 154 - -
Vimu11g04916 719 MobiDBLite consensus disorder prediction 223 266 - -
Vimu11g04916 719 Coils Coil 566 586 - -
Vimu11g04916 719 Pfam Golgin subfamily A member 5 517 692 IPR019177 GO:0007030
Vimu11g04916 719 PANTHER GOLGIN-84 1 700 IPR019177 GO:0007030
Vimu11g04916 719 MobiDBLite consensus disorder prediction 313 368 - -
Vimu11g04916 719 MobiDBLite consensus disorder prediction 267 281 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu11g04916 Vimu-Chr11 68743333 68748771 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu11g04916 - - pvu:PHAVU_002G329100g 1094.72
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu11g04916 11 68743333 68748771 Vimu11g04916 11 68743333 68748771 ECH