Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu11g04902 ATGACACTGACACTACCTCCTCCAAAATCGCCATTTTTAAAGACCCTTTTCTTCCTCCTCACTCTCTTCCCTAGCTACCTTGCTCTCCCTGATCCTGATGCTGCTGCTTCAGCATCACTTCAGCCTGTCACACCACACCCTTCTTCAACAGGCACAATCCCTGCATTCCCGGAACAAGCTGATGTTGAAGGGTGCCCTCTTAACCTCTCCGATGAACACTATGAAGGGATAAAGAGTGCATGCGGCTCCAGCAAAAATGCTGCAGACAAGGACCTCCACCGTAGCAGATGCTGTCCGGTGCTTGCTGCCTGGCTCTATTCTGCTTACTCGGTCACTGCCCTTGGTGGTGGAATGCAACACGAACGTGCCTCACAAGGCCATACCACATCCTATGACATGCCCTTGTTGCCTGATGATTCAGAAACATGTGTGAGCGATTTGGGGAAGGCCTTGAAAGTTAGAGGAATCCAGCTTGTTCAGCCTAACGAGACTTGTGATGTGGTGTATTGCTACTGCGGCATTAGGCTCCACCCTTTGACCTGCACCGAGTCTTTTTCAGTTACTCCAAGTGGGAGTCTTGTGGTGGATGGAAGTGTTAGAAGATTGGAAAGGGATTGCTTGAGTAGCAGCAACAATGTCAATAAGTTTCCAGGCCTAGGAGGATGCTCCAAGTGCTTGCATAGTCTCTATTCGGTCAGTTTTCAGCTTCTTCCTTCGTATTTTGTTTTGGCCAGTGTTCTTTCTTTAGCATTGTTTGTTTTAGAAGCGATGGATAGATCTTACATCTCTGAATATGATGAAACCGATCAAGGTTTCATCTCATTTAACTCTTTCATCTTCAGGCTCGATGATTGGGAAAGTCTTAGAAAGAAGTCTTCAAATTCAAGCAAGTCAGAAGATAGGACCACCAAGATCCATAACAAAGACTGTGAACTAATGGGTCTAACATGGCTTCTGGCAAAGAATCGAACAGCTTACATTCACACAGTTTCTGGGGTTCTTCGAGCTCTGATGTTGAGCAATGAAGGGTCTGACCCACAATCATGCACTCTAAACAGTGATGGAATGCCTCTTGCCGTTGATTCATCTGAAATGTCAGATGAATCTCCATCAAGCTACCTCCAAGCACCGATTTTTCTCTCTTTGTTACTCCTTGGAGTGCATTATTTCAGTGTACATGGCATTTGTAAATCTGAATCCGTGCTCTGTGCTTAG 1215 0.4584 MTLTLPPPKSPFLKTLFFLLTLFPSYLALPDPDAAASASLQPVTPHPSSTGTIPAFPEQADVEGCPLNLSDEHYEGIKSACGSSKNAADKDLHRSRCCPVLAAWLYSAYSVTALGGGMQHERASQGHTTSYDMPLLPDDSETCVSDLGKALKVRGIQLVQPNETCDVVYCYCGIRLHPLTCTESFSVTPSGSLVVDGSVRRLERDCLSSSNNVNKFPGLGGCSKCLHSLYSVSFQLLPSYFVLASVLSLALFVLEAMDRSYISEYDETDQGFISFNSFIFRLDDWESLRKKSSNSSKSEDRTTKIHNKDCELMGLTWLLAKNRTAYIHTVSGVLRALMLSNEGSDPQSCTLNSDGMPLAVDSSEMSDESPSSYLQAPIFLSLLLLGVHYFSVHGICKSESVLCA 404
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu11g04902 404 Pfam SPARK 63 236 IPR043891 -
Vimu11g04902 404 MobiDBLite consensus disorder prediction 37 56 - -
Vimu11g04902 404 PANTHER GPI-ANCHORED PROTEIN 15 233 IPR040376 -
Vimu11g04902 404 MobiDBLite consensus disorder prediction 41 55 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu11g04902 Vimu-Chr11 68674597 68676846 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu11g04902 - - gmx:100779809 453.366
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu11g04902 11 68674597 68676846 Vimu11g04902 11 68674597 68676846 ECH
Vimu11g04902 11 68674597 68676846 Vimu8g01617 8 22025227 22027483 PCT