Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu11g04896 ATGGCGGAACGTAGCAACGGGGAAATTCTAATGCTGGAAGCGCCACCGTCTTACGGTAAACCTACCAGCTCGGACGCCGAAATTATCGACGCATTACCTTACATCGACGATGACTACGCCGACCCCAGAGTCAAACTCGAGGTTGACCGTCTCGTCGAGGATGAGATGCGCCGCAGCTTCAAGAAACCCACAGATTTCCTCAAAGATTTCCCTCCTCTTCCCAGCTCCAATTTCGAGAACTACCCGATGATTGCAAGAGAGTACGAACGCGTGAGAGCTGGAAGGCCTCCTGTTGCTCTTGATAGGTCGCGCTACGAATTGGAAATGCCGCCGGCGAATAAAAGGAACGATGAAACTGCTTGGAAGCAGGCTCTTCATAGGGCTCAACGCCTACTGCAGTACCAGATGATGAGGATGGAAAATTTGGAGTTGATGTTAAAATACGGCCCTGATACATGGAAACTACACAACCAGCGATTGGAAGTATACTTATCAAGGTTTATTGTTACTGGTATATTTTTACAAGACACGGCAACGGTTATAGTTGTGTTATTTTTTTCTAGAATGCAGAAATTAGCACAAGAACAAAATGAAAAGATTGAAAAAGTAAATCGTGAAAGGAAATATCATCAGCAAAACACAGCGTATGAGCTTAATGCATTGTCCATGCAATGGAAGGAGCTCTGTCAGAAGAATATAGATATCAATGCTGCTTGTGCTTCAGTTGTAAACAGCATAAATGAATTGAAAAGTGAAGCAGCAGAAAGAGGCTGGAACTTGGAACCTGTGACAGAAAATGGTCAACTGCCGAATTCCGGATTATGA 825 0.4448 MAERSNGEILMLEAPPSYGKPTSSDAEIIDALPYIDDDYADPRVKLEVDRLVEDEMRRSFKKPTDFLKDFPPLPSSNFENYPMIAREYERVRAGRPPVALDRSRYELEMPPANKRNDETAWKQALHRAQRLLQYQMMRMENLELMLKYGPDTWKLHNQRLEVYLSRFIVTGIFLQDTATVIVVLFFSRMQKLAQEQNEKIEKVNRERKYHQQNTAYELNALSMQWKELCQKNIDINAACASVVNSINELKSEAAERGWNLEPVTENGQLPNSGL 274
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu11g04896 274 Coils Coil 186 213 - -
Vimu11g04896 274 Pfam Breast carcinoma amplified sequence 2 (BCAS2) 27 255 IPR008409 GO:0006397
Vimu11g04896 274 PANTHER BCAS2 PROTEIN 24 253 IPR008409 GO:0006397
Vimu11g04896 274 MobiDBLite consensus disorder prediction 1 23 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu11g04896 Vimu-Chr11 68627247 68630206 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu11g04896 K12861 - gmx:100783349 449.899
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu11g04896 11 68627247 68630206 Vimu11g04896 11 68627247 68630206 ECH