Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu11g04876 ATGGCTGCCACCACCACTGTTTCCTTCTCCTTCTCCTTCTTCTTCACGCCCTTTCGCAGTTTCCGATTCCAAACACCACCATCACCCCACCCCACAAGGCTCTCCATCACATGCCACTCTTCATCACCTACCTCCAACGACCCTCTCCGCGTGGCCTTCGCCGGCGGCGGCACCGGCAGCAACATCTACCCTGCGGTGGCAATCGCGGAGGAGCTCAAATCCCTGAACCCCACGGCCCAGTTTCTCTTCCTCGGCGCCCCCAACAGCGTGGAAAGCGCCGCAATCTCCTCCGCCGGCTACGACTTCGCCTCTGTCCCCGCACCGCCCGACACCAACCCTTTCTTCTTCCCTCACCGTTTCTTCAACTCTCTTCTCCAATGCCTCTTCCACCTTCGAGGCTTCCAACCCCACGTTCTCGTCAGCACTGGCGGCTACGTCTCTTTCCCCGCCTGCCTCGCCGCCAAGCTCCGAGGCACCATCGTTGTCATCCACGAGCCCAACTCCGTCCCCGGCTTCTCCAACACCCTCCTCTCCCCCCTCGCCGACGCCATCTTCGTTGCTTTCAACTCCACCCTCGACAGTTTTCCCAGGAACAAGTGTTTCGTGTGTGGCAACCCCGTTAGGTTCTCTGTTAGGAACCTCGTCTCCAAGGAAACCGCCACCTGTCATTTTTTTCCGGGTTTGGATTGTGAGAGCAGGGTTTTGTTGGTGCTTGCTGGCTCCTATGGCGCCAATTCAGTTAACATTGCGATGCTGAATTTGTACTATCGGATGCTGAGACGGGATAGCGGTTTGCGTATTATATGGCAAACTGGGGTTGAAGCCTTTGATGAAATGGATAGCCTTGTCAAGAGTCATCCACGCTTGTATATGACACCGTTCATGCATTGTATGGATTTGGCATATGCAGCAGCAGACTTGATTGTTTCTAGAGCTGGTGCAATGACTTGCTATGAAATATTGGCAACTGGAAAACCATCAATTCTGATACCTTCGCCATATTTCTCTGAGGGGAATCAGTTCAGAAATGCGTCCTTGATGGCAGACTTAGCTGGTGTGACTGTTATAACTGAGGATGAGCTAGACTCGAGTACACTCGCCATTGCAATTGAAAAGATTTTAAGGGACCAGAAGAAGATGGAAGACATGTCTGAGAGGGCTCTGAAAGCTGCAAACCCCAATGCCTCAGCTGAGATTGCAAAGCACATTCTCTCTCTTGTAAACGAATCAACCAAAAAGAAAAGAGATGTCTACAAAGTAGAATCTTAG 1269 0.5225 MAATTTVSFSFSFFFTPFRSFRFQTPPSPHPTRLSITCHSSSPTSNDPLRVAFAGGGTGSNIYPAVAIAEELKSLNPTAQFLFLGAPNSVESAAISSAGYDFASVPAPPDTNPFFFPHRFFNSLLQCLFHLRGFQPHVLVSTGGYVSFPACLAAKLRGTIVVIHEPNSVPGFSNTLLSPLADAIFVAFNSTLDSFPRNKCFVCGNPVRFSVRNLVSKETATCHFFPGLDCESRVLLVLAGSYGANSVNIAMLNLYYRMLRRDSGLRIIWQTGVEAFDEMDSLVKSHPRLYMTPFMHCMDLAYAAADLIVSRAGAMTCYEILATGKPSILIPSPYFSEGNQFRNASLMADLAGVTVITEDELDSSTLAIAIEKILRDQKKMEDMSERALKAANPNASAEIAKHILSLVNESTKKKRDVYKVES 422
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu11g04876 422 Hamap UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [murG]. 51 407 IPR006009 GO:0050511
Vimu11g04876 422 Pfam Glycosyltransferase family 28 C-terminal domain 234 392 IPR007235 GO:0016758
Vimu11g04876 422 Pfam Glycosyltransferase family 28 N-terminal domain 51 185 IPR004276 GO:0005975|GO:0016758|GO:0030259
Vimu11g04876 422 CDD GT28_MurG 50 402 - -
Vimu11g04876 422 PANTHER UDP-N-ACETYLGLUCOSAMINE--N-ACETYLMURAMYL-(PENTAPEPTIDE) PYROPHOSPHORYL-UNDECAPRENOL N-ACETYLGLUCOSAMINE TRANSFERASE 1 49 407 - -
Vimu11g04876 422 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 50 408 - -
Vimu11g04876 422 Gene3D Glycogen Phosphorylase B; 53 397 - -
Vimu11g04876 422 Gene3D Glycogen Phosphorylase B; 207 391 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu11g04876 39 412 Glycosyltransferase AT1G73740 48.329 1.68e-119 353
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu11g04876 K02563 - gmx:100808262 641.343
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu11g04876 11 68498559 68502375 Vimu11g04876 11 68498559 68502375 ECH