Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu11g04800 ATGACTGAGAAGGTTGCTAATGGCTCATGGTCTACTGGTTTATGTGACTGCTTCTCAGACTGCAGCTCTTGTTGTCTCACTTTTTGGTGCCCCTGTGTTAGCTTTGGAAGGGTGGCTGAGATTCTGGACAAAGGGTCAACTTCCTGTTGTCTTCATGGATCACTGTTCTGTATTCTTGCTATTTTCACTCATGTCGGAGGCTGTATCCATTCGTGGGTGTATCGTGCAAAATTGAGGAAGGTGTATGGGATTGAGGGACACCGCTGTAGTGATTGTTTGATCAGTTGTTTTTGTCCCCGTTTATCCATCTGCCAGGAGTATCGTGAGCTCAAAGCCCGAGGATTTCATATGTCTGCTGGTTGGGATGGAAATCTGCAAATGCAAACGCGTGGCGTCACTTCAGCACCGGCGGTGGAAGGTGGCATGAGCCGTTGA 435 0.4828 MTEKVANGSWSTGLCDCFSDCSSCCLTFWCPCVSFGRVAEILDKGSTSCCLHGSLFCILAIFTHVGGCIHSWVYRAKLRKVYGIEGHRCSDCLISCFCPRLSICQEYRELKARGFHMSAGWDGNLQMQTRGVTSAPAVEGGMSR 144
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu11g04800 144 NCBIfam uncharacterized Cys-rich domain 9 111 IPR006461 -
Vimu11g04800 144 PANTHER DUF614 FAMILY PROTEIN-RELATED 4 119 IPR006461 -
Vimu11g04800 144 Pfam PLAC8 family 10 109 IPR006461 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu11g04800 Vimu-Chr11 68061281 68062529 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu11g04800 - - ccaj:109809364 215.698
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu11g04800 11 68061281 68062529 Vimu11g04800 11 68061281 68062529 ECH