Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu11g04737 ATGGCCTCTTGTGCATCTTCGTCTTGGCTCGTGCTCTCATCCACCAACGCCAAACACAAACCCAGCTGCTTCAAATTCAATGCTCCCATCGCTTCACAAATTCAGTGGCATTCAGATTCGGATACCCAAAGAAACCTCCGTCACCCTCCGGAAATTAAACGCCATTGGGTGGAAGCATCTGATGAATCTTTGCATTCTCCGGAAAGATTCACAGTGGCCTCTTACAACATACTGGGGGATAGAAATGCTTCTCAACACTCGGATTTATACGTAAACGTTCCTTCTCGTTACATCAAATGGGATCGTCGCAAGAAGGTTATTTCTGATGAGCTTCTTGGATGGGACCCTGACATCATCTGCTTACAAGAGGTGGATAAATATTTGGAACTTTCAGACATCATGGTTAAAGCAGGATATGCTGGATCTTATCAGAGACGCACGGGAGATTCAGTTGACGGATGTGCCATGTTTTGGAAAACTGATAAGTTCCGGTTACTAGAAGGAGAGAACATTAAATTTAAGGACATTGGCCTTCGTGATAATGTTGCCCAACTATCAGTTTTTGAGTTCTTGCAGATGTGTGAATCTTACTCAAGAAGACTGTTAGTTGGTAACATCCATGTACTTTACAACCCAAACAAGGGAGAAGTTAAATTAGGTCAAATTCGTTTTCTCTCGTCAAGAGCACATTATCTCTCTGAGAAATGGGGTAATACCCCTGTTGTGCTAGCTGGTGATTTTAATAGTACTCCTCAGAGTGGAATATATAAGTTTTTGTCATCATCTGAGCTTAATGTCAAGCTGTATGACAAAAAGGAATTATCTGGACAGAAACGGTGTCGTCCTGCTCAAGTTATAGGGGAGAATAAAGAAACAGCTGGTCCAGTTGTAACCCTAGACGGCTTGTTAAAATGTTGGACAGATGAAGAGATAAAAATAGCCACCGGAGATTCTCAGCATCATTTGGCTGTGCATCCATTGAAGCTGAAAAGTTCGTATGCCACAGTTAATGGTTCAAAGAGTACACGGGGATTCAATGGTGAACCCTTGGCAACTTCCTATCACTCAAAGTTTCTTGGCTCTGTAGATTACTTATGGTACTCGGACGGTATTGTACCTACAAGAGTTCTTGACACCGTTTCAATGAGTGATCTCGTGAGGGCAGGTGGCCTCCCATGCAAGGTGGGAAGTGATCATTTGGCCTTGGTTTCTGAATTTACTTTCTCAGTTACAAACAATGAACCTACAGACATAGTGGCAGTAGTAGCAGCCGCACCAGCCATAGTAGATATTGAAGAGCCTAACAATCAGCAGTCATAA 1320 0.428 MASCASSSWLVLSSTNAKHKPSCFKFNAPIASQIQWHSDSDTQRNLRHPPEIKRHWVEASDESLHSPERFTVASYNILGDRNASQHSDLYVNVPSRYIKWDRRKKVISDELLGWDPDIICLQEVDKYLELSDIMVKAGYAGSYQRRTGDSVDGCAMFWKTDKFRLLEGENIKFKDIGLRDNVAQLSVFEFLQMCESYSRRLLVGNIHVLYNPNKGEVKLGQIRFLSSRAHYLSEKWGNTPVVLAGDFNSTPQSGIYKFLSSSELNVKLYDKKELSGQKRCRPAQVIGENKETAGPVVTLDGLLKCWTDEEIKIATGDSQHHLAVHPLKLKSSYATVNGSKSTRGFNGEPLATSYHSKFLGSVDYLWYSDGIVPTRVLDTVSMSDLVRAGGLPCKVGSDHLALVSEFTFSVTNNEPTDIVAVVAAAPAIVDIEEPNNQQS 439
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu11g04737 439 SUPERFAMILY DNase I-like 63 412 IPR036691 -
Vimu11g04737 439 PANTHER CARBON CATABOLITE REPRESSOR PROTEIN 4 46 408 - -
Vimu11g04737 439 Pfam Endonuclease/Exonuclease/phosphatase family 73 399 IPR005135 GO:0003824
Vimu11g04737 439 Gene3D Endonuclease/exonuclease/phosphatase 42 424 IPR036691 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu11g04737 Vimu-Chr11 67596787 67602318 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu11g04737 51 261 EF-hand Containing Proteins AT5G54130 27.354 1.19e-09 57.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu11g04737 - - gmx:100779393 726.857
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu11g04737 11 67596787 67602318 Vimu11g04737 11 67596787 67602318 ECH