Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu11g04553 ATGCTTTGGTTAGTGGAGCCTAAGGAATTTCTGTTTGCAGGTGGAATTGTTGAAAAGGAATTCTCTACTCGCAGAGGTGGAATTAGACGAGCAGAAAACTTACAGCTAACTGGAACCATGACAACATCAGATATTGCTCGAACAGTGGTTGGCATCATAGGAAACGTAATTTCTGGTGCCTTGTTTCTCTCCCCCGTGCCAACTTTCATCGAAATATGGAAGAAGAGATCAGTGGAGCAGTTCTCACCAATTCCATACCTAGCCATGGTGGTGAACTGCATGGTTTGGACCCTGTACGGTCTACCCATGGTGCACCCTCATAGCATTCTGGTGATAACCATTAATGGCTCTGGTTCTGTTGTTGCACTCATATTCATCGGACTCTTTTTGATCTACTCCGATGGAAAAAAGAGGCTCAAGGTTATCCTCTGGCTTTTGTTGGAACTCCTTTTTATCGCTGCTCTCACCTTTGTCACATTAACTCAAGTTCACACCTTCAAGAAACGCTCTGAAATTGTCGGAACAGTTTGCATTCTCTTCAATATTATGATGTATGCTTCACCCTTATCTGTCATGGTAATTTTCTTTCTATCTCTTCTTTTTTATTAA 609 0.4204 MLWLVEPKEFLFAGGIVEKEFSTRRGGIRRAENLQLTGTMTTSDIARTVVGIIGNVISGALFLSPVPTFIEIWKKRSVEQFSPIPYLAMVVNCMVWTLYGLPMVHPHSILVITINGSGSVVALIFIGLFLIYSDGKKRLKVILWLLLELLFIAALTFVTLTQVHTFKKRSEIVGTVCILFNIMMYASPLSVMVIFFLSLLFY 202
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu11g04553 202 Gene3D - 44 138 - -
Vimu11g04553 202 FunFam Bidirectional sugar transporter SWEET 48 138 - -
Vimu11g04553 202 PANTHER RAG1-ACTIVATING PROTEIN 1 56 193 IPR047664 -
Vimu11g04553 202 Pfam Sugar efflux transporter for intercellular exchange 49 136 IPR004316 GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu11g04553 Vimu-Chr11 66287995 66292731 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu11g04553 40 192 Miscellaneous Gene Families AT5G62850 49.020 1.30e-54 171
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu11g04553 K15382 - gmx:100802303 226.868
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu11g04553 11 66287995 66292731 Vimu11g04553 11 66287995 66292731 ECH