Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu11g04551 ATGGGGGACTCGAAACGCTGGACGGTGACCTACACAAAACACATCAAGCAGAAACGCAAGGTGTATCAAGATGGATTCCTAGAGCTCCACACTTCCACCAGCAAGGTTTCTCTGTACGATGAGTGCGAGAAAGTGTTGGAGTGTCGACTCTTGAAAAACGACGAAACTGTAATTTCTGGTGAATCGTTAGTTTTCAACGGTTACCTTGTGGACATAGGCGATCAGGAGGGAGAGAAAAAACCTGAATGTGATTTGAGTGTTGATAGGAGAAGCAGGAGTTTTTCAAGATTCAGGACTCCTGGTTTGAACTCTCTGATATACATTATTTTTCTTGTGAAGCATTTCATGTCCTCAATCTTATTTGCTGCTTATGTGTTTGTTTACGAGATTGTTCAAAACATACAAGAACGAATGAGAAGGAGAACGTCGGACGTATGCGGAGTCCTCTCAGTCCGTCACAAAAAGTTATCAGAGGTGATCGTAAAAATTGCAGAATTTAAGAGGAGAGAACTGGTTAAGTATGGATCACCAAAGATCAGTCAGCAGGCACAAAATCCTAGTATTGAAGAGTGGCATGTTGTATACACCACACAAGTGACTCAAAAGGCAAAGAAGTACCATGATGGTTTTTTACGATTAGTTCTTCGTGGATCCTGTGGGGCACAGATTACGCTGTTTGACACAAGTAAGAATGTCTTAGATAGCAGATTCCTGAAGAAAGATGATGTAATAAAACCCGGGGAATCAATTGCATTTGATTCATATTTGATTGACATTGGTGAGCATCAAGGTGGTTGCTCACCAGATTCCAAAGTTCTTGGAGACAAATTTACCAATGTTGAGGGAACGCAGACGGACATACAGAAAACTTATCTCCAAACTGATACCCATGTAACTGTTGAAAAAAGGGATATCCTTCCTTTAAATTTAGCATGGCAGGTCCTGTACACTACCGAGATAACTAAAAAAGCCAAGAAGTACCATGATGGCTTTTTACACATTGAATTTTGTGGATCATATGGAAAGCAGGTTGTTCTGTATGATTTGAGCAAAAGACCTTTACAACGCCGGTTCCTAAAGAAAGATGAAATTATAATGACAGGTGAATCGGTGTATTTTGATGGACATTTTGTTGAAGTAGGAGAACCTGAAGGAAGTAATCACTCTCCGGCGAAGTTAAGTGAAGGAGGGAATGGTGATAATGTTGAGAGGAGAGGACATGGGCAAAATGGCTGCCGCAAGGTCAATCCATCTTCTGCTAAAGGAAAACCTCCGAGTGAACTTTGTCTGGGGAAAGGATCTGGATTGGATTGTCTGGTTACCGAACGAGAAGATATAAAACCAAACAGGATAACCCCACCAATCAAGCCTTTACGTGATGCCGATCAAATACTGGCCATTTTACAGAATCCTAACCTGAAGCCTCGGGAGAGTTATGTAACAGGAGGCCAATCGCCCAATGGGGGTCAAAATACTGGGGACAACGTATCAGCTACTGCTGCGAAATCCTGTCAAAATTTGGGGGATAAGGAATCAGCTGCGGCTGCGAAATCATGTCAAAATATTGGGGATAAGGAATCAGCTGCGACGAAATCCCTCGATATTACATTGTCTGGAGCAGCATGTAGCGGTGACAGTTTCCAATCTACCGAGAATGTCAAATTGTCCCACCAGCCCTCTCAGAAGGATGCCCAGACAAATACGAATGAGAAGGATTCTGGTTATCAATCTTGCTTCATTACCAATGAAGAAAAGAGTGACAAGGAGTTTTCGTGTGAAAGGGAAACAATCCCAAGTTTTGAACTTGGATTTTAA 1815 0.4209 MGDSKRWTVTYTKHIKQKRKVYQDGFLELHTSTSKVSLYDECEKVLECRLLKNDETVISGESLVFNGYLVDIGDQEGEKKPECDLSVDRRSRSFSRFRTPGLNSLIYIIFLVKHFMSSILFAAYVFVYEIVQNIQERMRRRTSDVCGVLSVRHKKLSEVIVKIAEFKRRELVKYGSPKISQQAQNPSIEEWHVVYTTQVTQKAKKYHDGFLRLVLRGSCGAQITLFDTSKNVLDSRFLKKDDVIKPGESIAFDSYLIDIGEHQGGCSPDSKVLGDKFTNVEGTQTDIQKTYLQTDTHVTVEKRDILPLNLAWQVLYTTEITKKAKKYHDGFLHIEFCGSYGKQVVLYDLSKRPLQRRFLKKDEIIMTGESVYFDGHFVEVGEPEGSNHSPAKLSEGGNGDNVERRGHGQNGCRKVNPSSAKGKPPSELCLGKGSGLDCLVTEREDIKPNRITPPIKPLRDADQILAILQNPNLKPRESYVTGGQSPNGGQNTGDNVSATAAKSCQNLGDKESAAAAKSCQNIGDKESAATKSLDITLSGAACSGDSFQSTENVKLSHQPSQKDAQTNTNEKDSGYQSCFITNEEKSDKEFSCERETIPSFELGF 604
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu11g04551 604 PANTHER ZINC FINGER GRF-TYPE CONTAINING 1 1 268 - -
Vimu11g04551 604 Pfam Protein of unknown function (DUF2439) 5 80 IPR018838 -
Vimu11g04551 604 Pfam Protein of unknown function (DUF2439) 188 263 IPR018838 -
Vimu11g04551 604 Pfam Protein of unknown function (DUF2439) 311 387 IPR018838 -
Vimu11g04551 604 MobiDBLite consensus disorder prediction 551 576 - -
Vimu11g04551 604 MobiDBLite consensus disorder prediction 383 428 - -
Vimu11g04551 604 MobiDBLite consensus disorder prediction 475 497 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu11g04551 - - var:108322916 1040.8
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu11g04551 11 66276234 66282360 Vimu11g04551 11 66276234 66282360 ECH