Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu11g04547 ATGGAGAATAATCAGTCTTTTTGGCAATTCAGTGACCAGCTGCGTTTGCAGACATCCAATTTCGCAAACCTCTCTCTCAATGATTCGATTTGGAGCAACAGCTACGTGTCCAAGAGGCGTGATGAAAGGATTAATTTTGATATCAAAGTGGGTGGTGAGATCAACTCTTTCAAGTCAAAGGAGTCTGCTTCCGATTTCAAGGATAACATGAACGGATCTTTTCTTGCCATGAGTTACAACAACAACAACAACCTCAACCACAACAATAACAACATTCTGGGTGTTGGTTTGGATGCTGGGGTGGGTCTCAATGGAGGCTTCAACAAGGGAATTTACTCCAAACCTGCCTTTGCCAATCTTAACAACAACATTAACCTCAATATCAATCCTAAGGGGCACAAGGGTAAGGCCGAAGATGACCTTCTTCACCCTCCCAAATCTTCCAAGAAAAACAACAACCCCAACAAGAAACACGACAGTAACAACAGCACCGGCAACAATGATAACGGCAAGGATTCCAAGGCTGCTGCCGACAAGAGATTCAAAACACTGCCACCGTCGGAGTCTCTTCCTAGGAATGAAACCATTGGAGGCTACATCTTCGTTTGCAACAATGACACCATGGCTGAAAATCTCAAGAGGCAACTCTTCGGTCTGCCACCACGATACAGAGATTCTGTTCGGGCCATTACTCCAGGGTTGCCGCTTTTCCTTTACAACTATTCCACTCACCAACTCCATGGAATCTTTGAGGCTGCTGGTTTTGGAGGAACAAACATTGATCCAACGGCTTGGGAGGATAAGAAATGCCCCGGTGAATCTCGTTTCCCTGCTCAGGTGAGAGTGATCACAAGGAAAACATGTGAACCACTGGAGGAGGACTCATTCAGACCAATCCTTCACCACTACGATGGTCCCAAGTTTCGTCTTGAGCTGAACGTGCCTGAGGCCCTGTCTCTGCTCGATATTTTTGCTGAACAAGATACTTTCAACGATACTTTCAAGGCTTTCGATGCATAA 1020 0.4559 MENNQSFWQFSDQLRLQTSNFANLSLNDSIWSNSYVSKRRDERINFDIKVGGEINSFKSKESASDFKDNMNGSFLAMSYNNNNNLNHNNNNILGVGLDAGVGLNGGFNKGIYSKPAFANLNNNINLNINPKGHKGKAEDDLLHPPKSSKKNNNPNKKHDSNNSTGNNDNGKDSKAAADKRFKTLPPSESLPRNETIGGYIFVCNNDTMAENLKRQLFGLPPRYRDSVRAITPGLPLFLYNYSTHQLHGIFEAAGFGGTNIDPTAWEDKKCPGESRFPAQVRVITRKTCEPLEEDSFRPILHHYDGPKFRLELNVPEALSLLDIFAEQDTFNDTFKAFDA 339
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu11g04547 339 PANTHER - 12 328 IPR044832 GO:0034976
Vimu11g04547 339 Pfam Development and cell death domain 197 324 IPR013989 -
Vimu11g04547 339 MobiDBLite consensus disorder prediction 129 174 - -
Vimu11g04547 339 ProSiteProfiles DCD domain profile. 194 326 IPR013989 -
Vimu11g04547 339 MobiDBLite consensus disorder prediction 157 171 - -
Vimu11g04547 339 SMART dcd 194 326 IPR013989 -
Vimu11g04547 339 MobiDBLite consensus disorder prediction 132 156 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu11g04547 Vimu-Chr11 66255915 66257620 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu11g04547 - - gmx:100796450 561.992
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu11g04547 11 66255915 66257620 Vimu11g04547 11 66255915 66257620 ECH