Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu11g04544 ATGGGGTGTGCTTCCTCTAAGGGTGTGGATGTGGCAGCGGTCCCTTACCGGCCGGCGCCGACGAGCTTCGCGGTGTTCGACATAAACGCGATCGAGGAGCCATGGCTGAAGCACCTGAACGAGACCTCCACCCAAATCCACCAAGACAAAACCCCTCTCCCTGCTCCTATCCTCCACAAACTCAACATGCTCGACGCCACCGACGCCCCTCAATCATGGGAGGAGGTCAGCAAAACACTCCAAGACCTCAAACCCGTCATCACCAAACCACCTACCACCTCACCACCTCCGCAACCTCAACCTCAACCTCAACCTCCGCAAAAAACTAACTCCTTCCACACACTCGAAGAGTTAGACTCCAAGTTAAAGCCCAAGCCCCAAGCAAAAGAGCCCCACGCAGTGAAGCCCGAAACAGTAAAACCCGTTGTGGCTAACGTGACCGTGGCGCGAGGGAGCAAGTTGAAGGACAACGTGTTCATAGTGCGGGACAGGTTGGAGAGAGAGAAGGAGGAGAAGGAATCGGCGTTCGAGCGGCTTCGGCGGGATCCACTGAGCGCGTTTCCGGAGAAGTGTCCGCCGGGGGGGAGCGAGACGGTGGTGGTGTACACGACGTCGTTGCGGGGCGTGAGGAAGACGTACGAGGACTGCAACAGGGTGCGCGACGTGCTGGAGACGCACCGCGTGGTGTTCGACGAGCGCGACGTGTCGCTGCACGGGGAGTTTCTCCGGGAGGTGAAGGAGCTGGTGGGAGAGGCGGTGGCGCTGCCGCGGGTGTTCGTGAAGGGGAGGTACGTGGGGGGCTTGGAGGAGTTGGCGGAGCTGAACGAGACGGGTCGGCTGGGGAGGATACTGAGGGCCACACGTGTGGAGAGGGGGATTGGGAGGCAAACGTGTGGAGGATGTGGTGGGGCCCGGTTTGTGCCCTGTTTGGATTGTGGTGGAAGTTGCAAAGTTGTGGTGGATGGAATAGACAAACAGAGGTGTCCCAAATGTAATGAGAATGGCTTGGTTCATTGCCCTTCTTGTATTTGA 1032 0.5872 MGCASSKGVDVAAVPYRPAPTSFAVFDINAIEEPWLKHLNETSTQIHQDKTPLPAPILHKLNMLDATDAPQSWEEVSKTLQDLKPVITKPPTTSPPPQPQPQPQPPQKTNSFHTLEELDSKLKPKPQAKEPHAVKPETVKPVVANVTVARGSKLKDNVFIVRDRLEREKEEKESAFERLRRDPLSAFPEKCPPGGSETVVVYTTSLRGVRKTYEDCNRVRDVLETHRVVFDERDVSLHGEFLREVKELVGEAVALPRVFVKGRYVGGLEELAELNETGRLGRILRATRVERGIGRQTCGGCGGARFVPCLDCGGSCKVVVDGIDKQRCPKCNENGLVHCPSCI 343
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu11g04544 343 ProSiteProfiles Glutaredoxin domain profile. 187 291 - -
Vimu11g04544 343 PANTHER GLUTAREDOXIN DOMAIN-CONTAINING CYSTEINE-RICH PROTEIN CG12206-RELATED 76 342 - -
Vimu11g04544 343 FunFam Glutaredoxin family protein 196 292 - -
Vimu11g04544 343 Gene3D Glutaredoxin 197 291 - -
Vimu11g04544 343 CDD GRX_GRX_like 199 339 - -
Vimu11g04544 343 MobiDBLite consensus disorder prediction 85 111 - -
Vimu11g04544 343 Coils Coil 162 182 - -
Vimu11g04544 343 SUPERFAMILY Thioredoxin-like 192 284 IPR036249 -
Vimu11g04544 343 Pfam Glutaredoxin 199 265 IPR002109 -
Vimu11g04544 343 MobiDBLite consensus disorder prediction 89 106 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu11g04544 Vimu-Chr11 66250826 66252609 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu11g04544 K17479 - gmx:100809536 491.5
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu11g04544 11 66250826 66252609 Vimu11g04544 11 66250826 66252609 ECH