Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu11g04539 ATGAAGAGAGCACAGCAGAAGAGAGTTTCTGAGAGTGTCTGTGGCTGTGTTGCCGTCACCGCTTTCTGTTTTCTCCTAGCGGTCTACTCTCTTCTCCGATCGTTTTCCCTTCCTCGGAGATTTACTCCGCCGAGGAAACACCACTGCGATTGCGCCTCCGATTCAGCATCCGTGGCCGCTGCAGGCGCCGTGCCCTACCTCAACGGCGCCGTTGAAATGCTTGAGCCCAGTCCTGCTCCGGCGCCTGTGGTCTTGGGGGAGCGGTTGACGGGGTCGTCCATGATGGAGGAACTGGTTCCGGAGATTACGACGCACGCGCTCAGTTACTTGGATTATCCCAGTCTCTGTCGTCTCTCCATGACCAATTCTTTGATGCGAAAGGCCGCGAATGATGATAACGCTTGGAAGGCCTTGTATCACAAGGCTTTGTACTTTTTCTTGAGAGTGGTTATAAATGATGATGCAGAGTTTCTACTGTTGTATGTTTTGTTATTAGAGGAAAAGATTGAGTTGAATCGTGTCAGGAGTGCTCTTTCACAAATCTTAGAGGAGGACCTCCTAGAAAACAAGATGGTTGCAGCACTGGGTTGGTTATTTAACATGGATGAAGGGTTCCTAGAAGACACAAGGTGGCAGCACCTTAACCGTTTTAACATCATGCATGACTTCACATTGGAACAAGATAGTATCACACCCACTAATGGGTGGAAGGCGTACTATGCTGCAACAAGAGCAATTGTGAATATTAATACAGAATTCTTCAATATTGTAAGAGATAAGTCTCTTCCAGCAATGAGTCGTTTTTGGCTGAATGCGGATTATGTGAAGTGCATTCATGCCTCAGGAGAACTCTTTTCCGGTAATGCAGAGTTGGCAACTAGTATTCAACTGGGAGCAAGGATTGAATTTTCAGACATGGCTTGGGTTACCATGAGAACATATGTTGACATGGATACAGGGCCATTCAATGTGACCAATGTTTTTGAGTTCCATAATGGACGGTGGTATATGGTTCATCATCACAGTTCTATGATGAATGGGGATGTGGACCATCAGATAGTGCATGGATAA 1071 0.465 MKRAQQKRVSESVCGCVAVTAFCFLLAVYSLLRSFSLPRRFTPPRKHHCDCASDSASVAAAGAVPYLNGAVEMLEPSPAPAPVVLGERLTGSSMMEELVPEITTHALSYLDYPSLCRLSMTNSLMRKAANDDNAWKALYHKALYFFLRVVINDDAEFLLLYVLLLEEKIELNRVRSALSQILEEDLLENKMVAALGWLFNMDEGFLEDTRWQHLNRFNIMHDFTLEQDSITPTNGWKAYYAATRAIVNINTEFFNIVRDKSLPAMSRFWLNADYVKCIHASGELFSGNAELATSIQLGARIEFSDMAWVTMRTYVDMDTGPFNVTNVFEFHNGRWYMVHHHSSMMNGDVDHQIVHG 356
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu11g04539 356 CDD F-box_FBXL4 96 141 - -
Vimu11g04539 356 PANTHER F-BOX PROTEIN SKIP8 208 355 IPR044260 -
Vimu11g04539 356 Pfam SnoaL-like domain 247 346 IPR037401 -
Vimu11g04539 356 ProSiteProfiles F-box domain profile. 92 138 IPR001810 GO:0005515
Vimu11g04539 356 SUPERFAMILY NTF2-like 241 345 IPR032710 -
Vimu11g04539 356 SUPERFAMILY F-box domain 91 241 IPR036047 GO:0005515
Vimu11g04539 356 Gene3D - 86 243 - -
Vimu11g04539 356 Gene3D - 244 352 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu11g04539 - - gmx:100807571 233.802
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu11g04539 11 66233118 66237096 Vimu11g04539 11 66233118 66237096 ECH