Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu11g04524 ATGGCTCTAAATCTCTGCACTCCATGCTTCTCTCGCCTACTCTATCACCCTTCTTCTTCTCTGCCCAAACTCTCCGAAACCTGCGTCAACCACGCCGCCAATACCAACGCTCCTTTTCCCTCTCTTTTTTTGACCACTCCCTCTCTTTCCAACCTCTCGCGATTACTAAATTCCAAAGCCTCCGTCAGCGAGAGCCACAATGAAACCTCCGACGATACCGCCAACATACTCGACCAACAGCTCCTCCTCCAAGTCGCTGCGAACGCCAAAGACGCCGATGAGGCCTTGCAGATTATCGCCGACAATTCCTCCCGGAACGGCGGCGTCGTTTCCACCTCTGACTGCTGCTCAGTCATATCCGCTGCGCTTAACCGCAACAATCCTGAACTCGCTCTCTCCATCTTCTACGCTATGCGCGCCAGTTTAAATCCAGTTGACGAGAGTGGTCCCCTGGCTGCGAGATGGAAGTGGTCGCGGCCAAATGCAAATGTTTATGCATTGTTGATTCAGGGTTTAGCGGCGGTGTTAAGGGTTTCTGACGCTCTTAGGGTGATTAAGTATATTTGTGAGGTTGGCGTTTCACCTGGTGAAGAGGTACGTTTTGGGAAGGTAGTGAAATGTCCTAGTTGTCGGATTGCTGTTGGTGTTGCACAGCCACAACAAGGTATTCAGATAGTATCATGTTCCAAGTGTCGCTACCAATACGAACTTGTTTCAGGTGACATAGTCAGTATTGAATCAGAAGAAATCAGCATGGACATATCGGCGTGGGAAAGGGCATTAAGATACGTGAAACTGAGGAAGCAAAGCATTCCCTCTGCTGTTCACTCTATTGTGGTGCAGACCCCTTCTGGTATGGCTCGCACTCATAGATTTGCGACTGAAACAGTTGATCTGCCAGCACAAGAAGGAGAAAGGGTAACTATTGCTGTGGCAGCTCCATCAAATTTATATAGAAAGGTGGGCCCCTTTAAATTCAGTCCAAGGAACCCTGATTTCTATCCGGCTGAAGCTATGTGCATAACAAACCATAAAGATGGGCGGGAGTCACTACTGTTAAGAGCCCCACGAAAAGAAGAAAATTCTTCATTGCTGAAACCCTCCTTCCTTTTTCCACTTATCGCTTTGTTGGCAACAGGGGATGCTGCCTCTGGTCTTGTTGACCCTAGCCTTCCCCAGTTACTATCAGTTGTTGCAGTTTCAACTGTTGTTGTTGGGTCTACGTTGAACACTGTTGTTCTTCCCCAGTTTAATCAGCTTCCACAGAAATCAGTAGATGCAGTTGCGATCAAACAACGACTTTTATCTCAATATGATGTTCTTCTGTCCCGCATCAATGACCTCAAAGAAGCTGCTGAAAAAGAGATTTGGATGCTAGCTCGAATGTGCCAACTTGAGAATAAAATTTCAGCTGTTGGAGAACCTGCTTATCGGACTCGGAAAAGTAAAGTCAAGAGGGTGCGAGAGAGTCTGCAAAACTCCCTTAGAGGACGGATTGAACTTATTGATAGCTATGCTAGGATTTCCTCAATGATTGAAATCGAAGTGGAGATGGAGACTGATGTTCTTGCTGCGGAAACTGCTAGTAATATGGACAGTATCTCAGAACAGATAGAGCAAATCATGGAGCTTGAAAATTTGGAGGAGCGAGCAATTAAGATGTCATTCTCCCTCGTTCCTGTGATTTGGATTATAAAGGACTCAGAGGTGTTGACCTGTATGGGATGGAAAATTCAAGCAGAAGCCAATGATGAGGCTGAAAGACTTCTTAGTTCCCAGCCCATGCCTTTGGACGAAGTTTGA 1803 0.4659 MALNLCTPCFSRLLYHPSSSLPKLSETCVNHAANTNAPFPSLFLTTPSLSNLSRLLNSKASVSESHNETSDDTANILDQQLLLQVAANAKDADEALQIIADNSSRNGGVVSTSDCCSVISAALNRNNPELALSIFYAMRASLNPVDESGPLAARWKWSRPNANVYALLIQGLAAVLRVSDALRVIKYICEVGVSPGEEVRFGKVVKCPSCRIAVGVAQPQQGIQIVSCSKCRYQYELVSGDIVSIESEEISMDISAWERALRYVKLRKQSIPSAVHSIVVQTPSGMARTHRFATETVDLPAQEGERVTIAVAAPSNLYRKVGPFKFSPRNPDFYPAEAMCITNHKDGRESLLLRAPRKEENSSLLKPSFLFPLIALLATGDAASGLVDPSLPQLLSVVAVSTVVVGSTLNTVVLPQFNQLPQKSVDAVAIKQRLLSQYDVLLSRINDLKEAAEKEIWMLARMCQLENKISAVGEPAYRTRKSKVKRVRESLQNSLRGRIELIDSYARISSMIEIEVEMETDVLAAETASNMDSISEQIEQIMELENLEERAIKMSFSLVPVIWIIKDSEVLTCMGWKIQAEANDEAERLLSSQPMPLDEV 600
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu11g04524 600 PANTHER PENTATRICOPEPTIDE REPEAT (PPR) SUPERFAMILY PROTEIN 1 599 - -
Vimu11g04524 600 Gene3D Tetratricopeptide repeat domain 50 204 IPR011990 GO:0005515
Vimu11g04524 600 Coils Coil 431 451 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu11g04524 - - gmx:100781803 906.36
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu11g04524 11 66145938 66151907 Vimu11g04524 11 66145938 66151907 ECH