Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu11g04506 ATGACGGAACCACCAAAAGCCGATATCCATAACCACCACGACGAGGATGCAGATGCCGGAGCTGCTTTCGTTCTCCAATCCAAAGGTCAGTGGTGGCACGCGGGGTTCCATCTAACCACCGCGATCGTCGGGCCAACTATTCTGACTTTGCCTTACGCGTTCCGAGGATTAGGGTGGGGACTTGGATTCTTGTGCCTAACTACGATGGGAGTTGTTACCTTCTACTCCTACTTCCTCATGTCCAAAGTTCTTGATTACTGTGAAAAATCTGGTCGCCGACACATCCGTTTCCGAGAACTAGCCGCTGATGTTTTAGGGTCAGGATGGATGTTTTATTTTGTAATCTTCATTCAAACGGCAATCAACACTGGCGTTGGCGTTGGAGCAATCTTGCTTGCGGGTGAATGCCTTGAGCTTCCTTCTTTCCATTCTCTGCGACACATCAACTTGTGTTCACTACTTTTCGCCCTTGGCTATACCCTACTCGTGGTTGTTGCCTGTATTCATGCAGGTACATCCAAAAATGCCCCTCCAAGGGACTATTCTTTAGAACCTAATAAGTCTGCAAGGGCTTTCAGTGCCTTCACGTCCCTCTCCATAATTGCAGCAATATTTGGGAATGGCATATTACCCGAGATACAAGCAACTCTGGCTCCCCCTGCCACTGGGAAGATGGTAAAAGGCCTTATTATGTGTTATACAACAATTTTTTTTACTTTCTACTCTGCAGCAGTTTCTGGATATTGGGTGTTTGGAAACAAATCCAACTCAAACATTTTAAAGAGTCTGCTACCAGATAGTGGACCTTCTTTGGCCCCAACTTGGGTTCTTGCACTTGCAATCATCTTTGTTCTTCTTCAGCTCTTTGCCATTGGCCTGGTTTATTCTCAAGTTGCTTATGAGATAATGGAGAAGAAATCAGCTGATGTGAGGCAGGGGATGTTTTCCAAAAGAAATCTCATTCCTCGCATTATTCTCAGAACAATTTACATGATATGCTGTGGGTTTTTGGCAGCCATGTTGCCATTTTTTGGAGACATCAACGGTGTGGTTGGTGCTGTTGGTTTCATCCCTTTGGATTTCATTCTGCCTATGCTTATGTACAACATGACATACAAGCCTCCAAAATCATCCTTAACTTACTGGATCAACCTCTCGATTATAGTAGTTTTCACGGGTGCTGGAATCATGGGTGCATTCTCTTCTATAAGAAAATTGGTTCTTGATGCCAATCAGTTTAAGCTATTCAGCAGTGATGTTGTGGATTGA 1269 0.4444 MTEPPKADIHNHHDEDADAGAAFVLQSKGQWWHAGFHLTTAIVGPTILTLPYAFRGLGWGLGFLCLTTMGVVTFYSYFLMSKVLDYCEKSGRRHIRFRELAADVLGSGWMFYFVIFIQTAINTGVGVGAILLAGECLELPSFHSLRHINLCSLLFALGYTLLVVVACIHAGTSKNAPPRDYSLEPNKSARAFSAFTSLSIIAAIFGNGILPEIQATLAPPATGKMVKGLIMCYTTIFFTFYSAAVSGYWVFGNKSNSNILKSLLPDSGPSLAPTWVLALAIIFVLLQLFAIGLVYSQVAYEIMEKKSADVRQGMFSKRNLIPRIILRTIYMICCGFLAAMLPFFGDINGVVGAVGFIPLDFILPMLMYNMTYKPPKSSLTYWINLSIIVVFTGAGIMGAFSSIRKLVLDANQFKLFSSDVVD 422
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu11g04506 422 PANTHER OS05G0424000 PROTEIN-RELATED 30 391 - -
Vimu11g04506 422 Pfam Transmembrane amino acid transporter protein 28 137 IPR013057 -
Vimu11g04506 422 Pfam Transmembrane amino acid transporter protein 139 403 IPR013057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu11g04506 Vimu-Chr11 66025148 66030197 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu11g04506 1 422 Organic Solute Cotransporters AT5G41800 74.558 0.0 688
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu11g04506 - - gmx:100815232 757.673
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu11g04506 11 66025148 66030197 Vimu11g04506 11 66025148 66030197 ECH