Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu11g04503 ATGAGAACCGATTATTTGAAGCAGAACTTCCCCTTCACCCACAGAAACATCTTCCTCAAGTTTCTTCTCACCCTCTTCTTCCTAGGCCTCGCTTTCCGTATTCTCTTCTTTCACTCCCTGCCCTCGCAGATTTCCCCTGTTCTCGAATCCCCATTTCCTCAAAAAGCCACCTTATCAGAGCCCCACAATCCTCCTCACACTGCAGCTCTTTCACAACCACTTTCCGAACCTCCACCTGTTCTGGAACGTGTTCCCGAACCTCCTCCTCTTCTGGGTCGTCTTCCCGAACCCCCACCTGTTCTGGAATTCGTTTCTGAAACTGAAGATCAGCTCCCTCCCACAGAATCAGAACAATGTGATTACTTTAACGGGGATTGGGTTCCGAACCCGTCTGGTCCAACTTACACCAACGAAAGCTGCGACCTTATTGAAACTCATCAAAATTGCTTGAAGAATGGAAGGCCTGACAGAGAGTTTCTGTATTGGAGGTGGGCTCCTAGACAGTGTGATTTGCCGCAGCTTGATCCAAAGAGGTTTCTCAACATGATGCGGAACAAAGCCTGGGCATTCATTGGTGATTCCATTTCCCGCAACCATGTTCAATCCCTGCTTTGCATTCTCTCCCAGGTATGTATTGCCATATCATTAGTGGTTCTATTACTGATCATTAGGTCCAAATGTTGCTTTCCCTTTTGTTCGATTGTTTCTATGAGGATCAGACAACTGTCTTTGCACTTAAATTCTTATGTGTTGGACCAGATCTTGCTTTTGGTTCCAATGTCTAACCTAGGAGTCGCTTATAGGCATGAACCTATATATTTAGTGCGCGTGGAAAAACCTGTCTTAGTCTACCATGATGAGGAGTACAGGAGCAAAAGCTGGAACTTCCCCTCATACGACTTCCGTATATCAGTGATCTGGTCTCCATTCCTTGTGGAAGCTGCTATATTTGAAGACATAAATGGAGTTTCGAGTTCTGAAGTGGAGCTACATCTTGACAAACTGGACAGTAAATGGACGGATCAATACCTGGACTTTGATTACATCATTATTTCAACCGGGAAATGGTTTCTGAAATCTGCAATCTACTATGAGAATGACACCATATTGGGCTGCCACTCCTGTCCTAAGAGGAACCTGACAGAGCTGGGATTTAACTTCGCATACCGCAAAGCCTTAAAATTTGTGATGAACTTTGTAGTTTCTTCAAATCACAAAGGGATGGTCTTTTTCAGGACATTCACAGCTGATCATTTTGAAAATGGAGAGTGGTTCAGTGGGGGAACTTGCAATAGAACAGCACCGATTAAAGAAGGTGAGATGGAAAGGAAATATTTGAACCAGATGCTCCGTGACATAGAGTTAGATGAGGTTGGAAAAGCAGCTTCTGAAGCTTCAAAAAATGGTGTGAATTTTAAGCTTGTGGATTTCTCTGCACTCTCACAATTGAGACCTGATGGGCATCCTGGTCCATACAGGCAATTTCAACCATTTGCAAAGGACAAAAAGGCTAAAGTTCAGAATGATTGTTTGCATTGGTGCTTACCTGGGCCAATAGACACTTGGAATGATATAATAATGGAGATGATTGTGAAGGGGTAA 1602 0.4382 MRTDYLKQNFPFTHRNIFLKFLLTLFFLGLAFRILFFHSLPSQISPVLESPFPQKATLSEPHNPPHTAALSQPLSEPPPVLERVPEPPPLLGRLPEPPPVLEFVSETEDQLPPTESEQCDYFNGDWVPNPSGPTYTNESCDLIETHQNCLKNGRPDREFLYWRWAPRQCDLPQLDPKRFLNMMRNKAWAFIGDSISRNHVQSLLCILSQVCIAISLVVLLLIIRSKCCFPFCSIVSMRIRQLSLHLNSYVLDQILLLVPMSNLGVAYRHEPIYLVRVEKPVLVYHDEEYRSKSWNFPSYDFRISVIWSPFLVEAAIFEDINGVSSSEVELHLDKLDSKWTDQYLDFDYIIISTGKWFLKSAIYYENDTILGCHSCPKRNLTELGFNFAYRKALKFVMNFVVSSNHKGMVFFRTFTADHFENGEWFSGGTCNRTAPIKEGEMERKYLNQMLRDIELDEVGKAASEASKNGVNFKLVDFSALSQLRPDGHPGPYRQFQPFAKDKKAKVQNDCLHWCLPGPIDTWNDIIMEMIVKG 533
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu11g04503 533 MobiDBLite consensus disorder prediction 55 70 - -
Vimu11g04503 533 PANTHER PROTEIN TRICHOME BIREFRINGENCE-LIKE 9-RELATED 288 526 IPR029962 GO:0016413
Vimu11g04503 533 MobiDBLite consensus disorder prediction 78 96 - -
Vimu11g04503 533 Pfam GDSL/SGNH-like Acyl-Esterase family found in Pmr5 and Cas1p 171 210 IPR026057 GO:0016740
Vimu11g04503 533 Pfam GDSL/SGNH-like Acyl-Esterase family found in Pmr5 and Cas1p 276 529 IPR026057 GO:0016740
Vimu11g04503 533 MobiDBLite consensus disorder prediction 55 98 - -
Vimu11g04503 533 Pfam PMR5 N terminal Domain 117 170 IPR025846 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu11g04503 Vimu-Chr11 66015026 66017663 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu11g04503 - - gmx:100779118 705.286
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu11g04503 11 66015026 66017663 Vimu11g04503 11 66015026 66017663 ECH