Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu11g04501 ATGGTGAAACATCGCCTTAGAGAGTCTATCAAATCTTTGTTTGGAAGTCATATTGACCCTAATAAAGAAGAGCAGCTCCACGTAGCTAAAGCAGATATTGAAGACAAAGTAAAAGAAATATTGAAACTTATTAAAAATGACAACCTTGAAGAGGATGGTACCCCAGTGCAACTTTCCAAGAGGGAACCACTTATTGAACTGATTGAAGATTTCCACAATCAATACCAATCACTACATGCGCAATATGATAATCTAACAGCTGAGTTAAGGAAAAGGATCAAGGGCAAGCGAGAAAATGGGAGTTCTTCATCCAGCTCGGACTCAGATTCAGGTTCAGATTATTCTTCAAAGAACAAAGGCAACAAAAACGGACAACTGGAAAATGAATATCAAAAGACAATCGGAGACTTAAAGCAAGAGCTTGAAGTGGTGCATGCAGAAGTGGCTGAATTAAATCGGAAGTTGACAATTTCGCATGAAGAGAAGGAGGATCTTAATTCCAAATATCTTGCAGCACTGAGCAAGATACAAGAAGCAGATACAGTTAACATGGATTTGAAAAGTGATGCTGAAGTATTAGGCACTCAAAGATCTAAACTTTTGGCTGAGAATGCTGAACTAAGTAAACAAGTGGATATTGCTGGCAAAAAAGAAGCTGAGCTGAGTCAAAGATTGGAAGAGTTGAAGATAGAAAAAGATAGTTTGACCATGGAGAAGGAGACAACTCTCCGACAGATTGAGGAGGAAAAGAACATTACTGATGGCCTCAGAAACCTTGTTGATCAACTGAAAGATGATAAATTAGCTCTTGGCAAAGAGTTAGAGGCAGTTACAGGTGAACTTTCCATTCTGAAACCGCAGTTGGAAGACGGAGAACAGAAAATGACAGGTATAAGCCACAATCTGAAAGTTGCTGAGGAAGAAAACCAATCTTTAAAAGAGCAACTTTCACAGGCTTCAAATGAGGTTCAGCTGGCTCAGAGTAGAATACAAGAATTTGTAGCTGAATCAAGTCAGTTAAAAGAGAAACTTGATGTGAGTGGAAGGGAAATTAATGCCTTTACTCTGATGCATGAAGGTTTTCAGAAAGAATCCTCAAATCGTATCGGGGAACTTGAGGAACAGGTCACCAACCTGGAGTTGGAGTTAGAATCACTGAAAAACCAGAAAAGAGATATAGAAGTACAAATGAAGAGCAGCACCACTGAAGCAAGGGAACTAGGAGAGCACAATTCAGCCCTACAAAACCAAATATCACAACTCGAATTGAAGTCCAGAGAAAGAGAAGAGGAGCTATCTGCAATGGTGAAGAAACTTGAAGATAATGAGAATGAGTCATCTTTGAAAATTTCAGATTTAACATCTCTGGTAAACAAGATGCTAACTACGATTGGGACACTACATACTCAAAAAAATGAACTCGAAGAGCAGATAATTTTTAAAAGTAACGAAGCTTCCACCCAAGTGGAAAACATCACAAATGAGGTGAATGCATTGCAGCAAGAAGTGACGTTCCTCCAGCATCAGAAATCTGACTTGGAAGCTCAGTTAGTAGAAAAAGTCAACGAAAATTCCAAGAATATGATTGAAATGCAAACTCTGAAAGAGGAAATTGACCGAAAAATCCTTGAACAAGAGAGACTTCTGGAAGACAGAGAAAATTTAGCCATGCAGCTAAGGACATTGGAGTCAGAGATGAACACCATTCAGAACAAAAACAGTGAAGCTGAAGAGCAAATGAAACAGGGAATGTTGGAGCTACAAGAAAAAATAGCAGAAATAGAGAAGATATCAACAGATAGAGAATCAAATTTTTCGATTCTCCAGGATAAGTTTATTAGCGCAGAGCAAGCAATTTCATCTCAGATAATGGCCTCCAGTGAACAAATTAAGAATCTTGAACATGATTTGGCATCACTGCAGAAAGAGAAACACGAATTAGAAAAGCAGTGTGAAAAGCTGAAGTTAGAGATGGATTCTATACAGAACCAAAAGAGTGAAGTTGAAGAACAAATGAGAACTAAAGACCATGAGAACTCTGGACTACGAGAAGAAATTTTGGGATTGCAGGGATCAGTAGCTGTGCTGGAGAAGACATTAGCTGAGAAAGAGGCAGAGGTATCCAGTTTACAGAATGAGAAACGGGAAGTAGAACAGCAGTGTGTAAATCTGAAGGTGGAGCTGGATTCCGCACAAAACCAGAAAGTTGAAGTTGAAGAGCGGTTGAGAACTAAAGACCAAGAGAACAAGGAACTGAGAGAGGAAAAATTTGGATTGCAGGGTACAATTACTGCACTGCAGAAAACATTAGCCGATAAAGAGGCAGAACTATCCAGTTTACAGGAAAAGCTTCATGAAAAAGAGAGCGAGGCTTCCGGCCAAATAACTGTCTTCACTGTCCAGATTGAAAATCTGAAACAAGATTTGGTGTCCTTGCAGAATGAGAAACAGGAAGTAGAACAGCAGTGTGAAAAGCTGAAGGTGGAGCTGGATTCCTCTCAAAACCAGAAGGGTGAAGTTGAAGAGCAGATAAGAGCTAAAGACCATGTGAACACCGAACTGAAAGAGGAAATTTCGGGATTACAGGGAACAATTACTGTACTGGAGAAAAGATTAGCTGAGAAAGAGTCAGATTTATCCATTTTACAGGAAAATCTTCACCAAAAGGATAGTGAGGCTTCTGCCCAAATAACTGCTTTAACAGTCCAAATTGATGATCAGAAACATGATCTGGTGTCCCTACAGAATGAGAAACAAGAATTAGAACATCAGTGTGAAAAGCTAAAGATGGAGGTGGATTCCACACAAAACCTGAAGGGCGAAGTTGAGGAGCAAATCAGAGCTAAAGTCCTTGAGAACACTGAACTGAGAGAGGAAATTTTGAGATTGCAGGGAACGATTAGTGCACTGGAGAAAACATTAGCTGAGAAAGAGTCAGAGTTATCCACTTTACAGGAAAAGCTCGACGAAAAAGAGAGTGAGGCTTCCGGACAAGTAATTGCTTTCACGGCCCAAATTGATGATCTGCAGAAAGGCTTACTTTCATTACAGAAAACAAAAGAAGAATTGGAGCTCCAGCATGAAAAAATTAGTCAAGAACATGCAGAAAGCCTTGTAATGGTAGAGAATGAAAAGAATGACATATCAAGCAGGTCTATGGATCTTAAGAGAACACTAGAAGAGCGAGAAGATTCATATCAGAGGTTAAATGAAGAATATAAACAAATTGATGGTTTGTTTCAGGAATGCATGGTCAAGCTTGAAGTTGCAGAGAAGAAAATTGAAGAAATGGCAGCATGGTTTCATGAACGAATTGAGTTGAAAGATCAGAAGGTAGCTGATTTGGAACATACAGTAGAAGACCTAAAAAGAGACCTAGAAGAAAAAGGAGATGAAATCAGTACTTTGCTTGAGAATGTTCGGATCCTTGAGGTTAGGCTTCGTCTGTCAAACCAGAAGCTTCGGGTCACAGAACAATTGTTGAGTGAGAGAGAAGAAAGCTTTAGGAAGACGGAGGAAAAGTTTCAGCAAGATCAGACAGCGCTTGAAGACAGAATTGCTATTTTATCAGCACTAATAACTGCCAAGAATGAAGCCTTCGATGGAATTGTTTCTAATGTCAGAGAGTGTGTGAACAGTGTCATGACTGGCATAGAAATTGTAAGCTGTCGAGTTTCTGATGACTGCAAAAATTACGAGGAGAGTGTCTACAACATTTCACATGAGCTTGAGATTGCAAGGGGGCATGTGAGGGATATGAATAAGGAAAAAGAGCAGCTAAAGAGAGACAAAAGCCAGTTGTTGGAGCAACTGCAAGTTAAAAATGAAGAGGAAGTGGCTTTGAGGAAGACAGTTGAGAAGTTAGAGGCAAAGAGTGGAAAGGAAGAATCAGAGAAGATGAATCTGACAACAACTGTAGAACAACTAAAGAAGACAGTTAGAGAGCTGGAGAAAATGATGAAAGAGAAAGAGAACGGTATGTTGGACTTGGGAGAGGAGAAGAGGGAAGTTATCAGGCAGCTGTGTTTGTGGATTGATTATCATCGCAGTCGCTATGACTATCTCAAGGACATTATATCAAAGACTCGCAGTGGCCAGAGAGCAGCATAA 4110 0.3971 MVKHRLRESIKSLFGSHIDPNKEEQLHVAKADIEDKVKEILKLIKNDNLEEDGTPVQLSKREPLIELIEDFHNQYQSLHAQYDNLTAELRKRIKGKRENGSSSSSSDSDSGSDYSSKNKGNKNGQLENEYQKTIGDLKQELEVVHAEVAELNRKLTISHEEKEDLNSKYLAALSKIQEADTVNMDLKSDAEVLGTQRSKLLAENAELSKQVDIAGKKEAELSQRLEELKIEKDSLTMEKETTLRQIEEEKNITDGLRNLVDQLKDDKLALGKELEAVTGELSILKPQLEDGEQKMTGISHNLKVAEEENQSLKEQLSQASNEVQLAQSRIQEFVAESSQLKEKLDVSGREINAFTLMHEGFQKESSNRIGELEEQVTNLELELESLKNQKRDIEVQMKSSTTEARELGEHNSALQNQISQLELKSREREEELSAMVKKLEDNENESSLKISDLTSLVNKMLTTIGTLHTQKNELEEQIIFKSNEASTQVENITNEVNALQQEVTFLQHQKSDLEAQLVEKVNENSKNMIEMQTLKEEIDRKILEQERLLEDRENLAMQLRTLESEMNTIQNKNSEAEEQMKQGMLELQEKIAEIEKISTDRESNFSILQDKFISAEQAISSQIMASSEQIKNLEHDLASLQKEKHELEKQCEKLKLEMDSIQNQKSEVEEQMRTKDHENSGLREEILGLQGSVAVLEKTLAEKEAEVSSLQNEKREVEQQCVNLKVELDSAQNQKVEVEERLRTKDQENKELREEKFGLQGTITALQKTLADKEAELSSLQEKLHEKESEASGQITVFTVQIENLKQDLVSLQNEKQEVEQQCEKLKVELDSSQNQKGEVEEQIRAKDHVNTELKEEISGLQGTITVLEKRLAEKESDLSILQENLHQKDSEASAQITALTVQIDDQKHDLVSLQNEKQELEHQCEKLKMEVDSTQNLKGEVEEQIRAKVLENTELREEILRLQGTISALEKTLAEKESELSTLQEKLDEKESEASGQVIAFTAQIDDLQKGLLSLQKTKEELELQHEKISQEHAESLVMVENEKNDISSRSMDLKRTLEEREDSYQRLNEEYKQIDGLFQECMVKLEVAEKKIEEMAAWFHERIELKDQKVADLEHTVEDLKRDLEEKGDEISTLLENVRILEVRLRLSNQKLRVTEQLLSEREESFRKTEEKFQQDQTALEDRIAILSALITAKNEAFDGIVSNVRECVNSVMTGIEIVSCRVSDDCKNYEESVYNISHELEIARGHVRDMNKEKEQLKRDKSQLLEQLQVKNEEEVALRKTVEKLEAKSGKEESEKMNLTTTVEQLKKTVRELEKMMKEKENGMLDLGEEKREVIRQLCLWIDYHRSRYDYLKDIISKTRSGQRAA 1369
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu11g04501 1369 Coils Coil 851 892 - -
Vimu11g04501 1369 Coils Coil 531 597 - -
Vimu11g04501 1369 Coils Coil 1299 1333 - -
Vimu11g04501 1369 Coils Coil 1006 1036 - -
Vimu11g04501 1369 Coils Coil 763 790 - -
Vimu11g04501 1369 Coils Coil 693 755 - -
Vimu11g04501 1369 PANTHER COP1-INTERACTIVE PROTEIN 1 711 826 - -
Vimu11g04501 1369 Coils Coil 1105 1139 - -
Vimu11g04501 1369 MobiDBLite consensus disorder prediction 94 127 - -
Vimu11g04501 1369 SUPERFAMILY Myosin rod fragments 621 731 - -
Vimu11g04501 1369 Pfam KIP1-like protein 14 83 IPR011684 GO:0003779
Vimu11g04501 1369 MobiDBLite consensus disorder prediction 99 127 - -
Vimu11g04501 1369 Coils Coil 482 523 - -
Vimu11g04501 1369 Coils Coil 623 685 - -
Vimu11g04501 1369 Gene3D - 809 952 - -
Vimu11g04501 1369 Gene3D - 608 757 - -
Vimu11g04501 1369 ProSiteProfiles Networked (NET) actin-binding (NAB) domain profile. 10 89 IPR011684 GO:0003779
Vimu11g04501 1369 Coils Coil 211 266 - -
Vimu11g04501 1369 Coils Coil 68 88 - -
Vimu11g04501 1369 Coils Coil 288 343 - -
Vimu11g04501 1369 Coils Coil 1243 1291 - -
Vimu11g04501 1369 Coils Coil 134 168 - -
Vimu11g04501 1369 Coils Coil 897 994 - -
Vimu11g04501 1369 Coils Coil 362 445 - -
Vimu11g04501 1369 Coils Coil 795 843 - -
Vimu11g04501 1369 Coils Coil 1052 1079 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu11g04501 - - gmx:100778046 2004.95
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu11g04501 11 66004492 66012765 Vimu11g04501 11 66004492 66012765 ECH
Vimu7g02396 7 20565400 20566104 Vimu11g04501 11 66004492 66012765 PCT