Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu11g04482 ATGGGTGCGAAAGTTTCCCTCATAATTCTCTTTACGCTCCTCATTGCTTCATGTTCAGCCAAGAGTAAGCAATACACGCCATGCAAAAGCTTGGTCCTCTTCTTCCACGACATCATATACAATGGAAACAATGCAGGCAATGCAACGTCTGCAATAGTGGCCGCTCCAGAAGGTGGTAACTTGACCAAACTGGCCGGCCAGTTCCACTTTGGAAACATAGTGGTTTTCGATGACCCCATCACGTTGGACAACAACCTTCACTCAAAACCCGTCGGAAGGGCTCAAGGCTTTTACATCTACGACACCAAAAACACTTACACTGCCTGGCTTGGATTTACGTTTGTTCTTAACACCACCGACCATCAGGGAACCATCACTTTCGCCGGAGCTGACCCCATCATGCAGAAGACTAGAGATATCTCTGTCACCGGTGGCACCGGCGATTTCTTTATGCACCGAGGAATTGCCACCATTATGACCGATGCATTTGAGGGCGAAGTTTATTTCCGACTTCGTGTTGATATCAAGTTCTACGACTGTTGGTCATATTAA 552 0.471 MGAKVSLIILFTLLIASCSAKSKQYTPCKSLVLFFHDIIYNGNNAGNATSAIVAAPEGGNLTKLAGQFHFGNIVVFDDPITLDNNLHSKPVGRAQGFYIYDTKNTYTAWLGFTFVLNTTDHQGTITFAGADPIMQKTRDISVTGGTGDFFMHRGIATIMTDAFEGEVYFRLRVDIKFYDCWSY 183
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu11g04482 183 Pfam Dirigent-like protein 28 173 IPR004265 -
Vimu11g04482 183 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 18 - -
Vimu11g04482 183 Gene3D - 18 176 IPR044859 -
Vimu11g04482 183 PANTHER DIRIGENT PROTEIN 8 181 IPR004265 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu11g04482 Vimu-Chr11 65843647 65844198 Dispersed/Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu11g04482 - - gmx:100820276 315.464
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu11g04482 11 65843647 65844198 Vimu11g04482 11 65843647 65844198 ECH