Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu11g04472 ATGTTGAGTACCTCTTCTTATTCTGCCTTTAGCCGCACCTTTCTTCCGATTAAGGGTTTTCCCCGACCCGTCGCACTACGTCCTTTTCCTCGGATCTTGGAATCCCATGCCAAGTCTCCCAGAAATAGATTGAGTATTCAGTGCTTTAGGCACGATCATCTTTCTCCAGAAACACCCCAACCTGAAGTTATAGAGCACTATTTTCATGAGGACCTGGTGCAATCTGAATTCAGTGACTCCAGTGTTGTCACCAAAAGAGACTGGAAATCATCCCTTCAGAAGCTTGCAGTGCTTTGCCGTTCGGTTCAGACCATCCTGTCACGTTTGGCTTCGTCAGTCCTCTCCCGTTGGGTCCAGCAGTCCTGTCCTCCTGTTCTGATTCGTCCAACTGCTCGCTTTGCTTCACCCCACACGATTCCGGCAACCTTGCGATACGACAGTTTCTTGAAGCTACAAGTTTTTGATAACTTTCTTGATCAGGTTCTTGATTCGTGTTCGTGTGATGTCACTGGTGATAGATTTGAAAGGCTAATCTTCGAGAGCAGGATTGACAGTGGAAGTAATGCTTCAGTCGTGGAACAAGCTGCAAATGAAGTATTCAAGGTAATTGGTTATCCATGGGTTGTGCCATGGACTGCAATGACTATATTACAAGTTATGCTTCTTTGGACGACAGCATTTTGGTTTATAGGATCTTGGATGATTCCTTTTGCTGCCCATATAACTGGCTTTAGCAAGGAGTCTTTAACATTTAGAGGGCAAGCACTGTTCAGCCTCGTTACCGATGTAACTGAAGGACTTGCTGGAGTTGCAATTCTTCTTCGCTGTCTTTCTCGATTTCGCCCTCTTCCACCGGACTGGTTCAGGTTTAGCCTGAAAGGCAATTGGCAATTAGATGTCATAATGGGATGTCTCATGTTTCCACTTGTCAATCGGCTGTCACAGTTCAACCTGGACCTACTACCCCTTTTACCCTCTACACCTGTCACCCTTTCTAGTGTTGAACAATCAATAAGGGCAAGAGATCCAGTGGCAATGCTATTGTATGCAACAGTTGTATCAGTCTGTGCTCCTGTATGGGAAGAGATAGTTTTCCGTGGCTTTCTACTCCCATCCCTCACCAAATACATGCCAGTGTGGTGTGCAATACTGGTAAGTTCAATTGCCTTTGCGCTTGCACACTTCAACATACAGAGGATGCTGCCCCTTATATTTCTTGGCATGGTAATGGGTGTGATATATACACGATCAAGGAATTTACTGCCACCAATGCTGTTGCATAGTCTTTGGAATGGATTTGTCTTCTTAGATTTGATGAAATAG 1323 0.4497 MLSTSSYSAFSRTFLPIKGFPRPVALRPFPRILESHAKSPRNRLSIQCFRHDHLSPETPQPEVIEHYFHEDLVQSEFSDSSVVTKRDWKSSLQKLAVLCRSVQTILSRLASSVLSRWVQQSCPPVLIRPTARFASPHTIPATLRYDSFLKLQVFDNFLDQVLDSCSCDVTGDRFERLIFESRIDSGSNASVVEQAANEVFKVIGYPWVVPWTAMTILQVMLLWTTAFWFIGSWMIPFAAHITGFSKESLTFRGQALFSLVTDVTEGLAGVAILLRCLSRFRPLPPDWFRFSLKGNWQLDVIMGCLMFPLVNRLSQFNLDLLPLLPSTPVTLSSVEQSIRARDPVAMLLYATVVSVCAPVWEEIVFRGFLLPSLTKYMPVWCAILVSSIAFALAHFNIQRMLPLIFLGMVMGVIYTRSRNLLPPMLLHSLWNGFVFLDLMK 440
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu11g04472 440 Pfam Type II CAAX prenyl endopeptidase Rce1-like 347 432 IPR003675 GO:0004222|GO:0016020|GO:0071586
Vimu11g04472 440 PANTHER CAAX AMINO TERMINAL PROTEASE 98 435 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu11g04472 Vimu-Chr11 65779121 65788212 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu11g04472 K07052 - gmx:100816897 470.314
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu11g04472 11 65779121 65788212 Vimu11g04472 11 65779121 65788212 ECH