Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu11g04467 ATGGCTCAGCAGAGTCCTGATCAGCAGATCAAGCCCTTGGCTCCATTCATATCATCATCCCACTTCAACTCACAAGAAGATCAAGACTACGCATTCACACACAGAAAAAACATTCGAATAAGAAAGTTTATCCAGTGCTGCGGTTGTGCCACTGCAATTGTTGTGCTACTTGTGGTCATAGTACTGGTCTTGGGCTTCACCGTTTACAATGTCAAAGACCCCCAGGTGAGGATGAACGGGGCTACCCTTATCAGTGGAACTTTCGCCAACGGTGCTACTGACAACGTTACGATTCTTGCTGATATATCTGTGAAGAATCCAAACGCTTTTACCTTCAGGTTTGAAAACGCCTGGACCGATGTTTACTATAATGGAGAGGAAATAGGTGATGGTCAATCTCCATCGGGGAAAGCCAAGGCCAGAAGAACCATAAGGGTCAACACCACCATGGAGATTAATGCAAAGAAGCTTCTGGCGATTCCAAATTTGGATACTGACCTAAAGGACCAGGCTTTGAATATCAGCAGCTATACCAGGATTGATGGTAAGGTCAAAATACTAAACATTTTTCCGAGGAAAGTTGTGGTTGAGATGAATTGCACAATCACATACAACATCACCACTGGGTCGATTAAAAATGGTGACAATTGTCTTGGAAACGTTGATATTTAG 672 0.4345 MAQQSPDQQIKPLAPFISSSHFNSQEDQDYAFTHRKNIRIRKFIQCCGCATAIVVLLVVIVLVLGFTVYNVKDPQVRMNGATLISGTFANGATDNVTILADISVKNPNAFTFRFENAWTDVYYNGEEIGDGQSPSGKAKARRTIRVNTTMEINAKKLLAIPNLDTDLKDQALNISSYTRIDGKVKILNIFPRKVVVEMNCTITYNITTGSIKNGDNCLGNVDI 223
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu11g04467 223 SMART why 81 203 IPR013990 GO:0009269
Vimu11g04467 223 Gene3D - 60 206 - -
Vimu11g04467 223 PANTHER LATE EMBRYOGENESIS ABUNDANT (LEA) HYDROXYPROLINE-RICH GLYCOPROTEIN FAMILY 36 207 - -
Vimu11g04467 223 Pfam Late embryogenesis abundant protein 102 201 IPR004864 -
Vimu11g04467 223 SUPERFAMILY LEA14-like 54 158 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu11g04467 Vimu-Chr11 65752803 65754017 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu11g04467 - - gmx:100781009 310.071
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu11g04467 11 65752803 65754017 Vimu11g04467 11 65752803 65754017 ECH