Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu11g04449 AAAGTGGTGGTGAAATTGGATTTACACGATGAAAAAGCAAAGCAGAAGGCCATGAAATCGGTTTCTAGCCTGTTAGGTATTGATTCGATCTCGATGGACATGAAGGAGAAGAAACTGACTGTAGTGGGAGAGATAGACCCTGTGAGTGTGGTGAGCAAATTGAGAAAAAGTTGGCGCACAGAAATTCTAACTGTTGGGCCGGCAAAAGAGCCAGAGAAGAAGAAAGAAGAAGAGAAGAAAGATGAGAACAAGAAGAAAGATGATGAGAAGAAGAAAGATCCAAATCAACAAATTGAGGAGCTTGTGAAGCTCTGCAAAGCATGCAATCCTCACATGACCCCATACTATTATGTTCAGAGTGCTGAAGAAAACCCTAATGCTTGTGTTATTTCTTGA 396 0.4116 KVVVKLDLHDEKAKQKAMKSVSSLLGIDSISMDMKEKKLTVVGEIDPVSVVSKLRKSWRTEILTVGPAKEPEKKKEEEKKDENKKKDDEKKKDPNQQIEELVKLCKACNPHMTPYYYVQSAEENPNACVIS 131
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu11g04449 131 ProSiteProfiles Heavy-metal-associated domain profile. 1 66 IPR006121 GO:0046872
Vimu11g04449 131 PANTHER COPPER TRANSPORT PROTEIN FAMILY-RELATED 1 128 - -
Vimu11g04449 131 Pfam Heavy-metal-associated domain 4 57 IPR006121 GO:0046872
Vimu11g04449 131 Coils Coil 72 92 - -
Vimu11g04449 131 Gene3D - 1 70 - -
Vimu11g04449 131 MobiDBLite consensus disorder prediction 64 96 - -
Vimu11g04449 131 MobiDBLite consensus disorder prediction 66 96 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu11g04449 Vimu-Chr11 65590197 65591071 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu11g04449 - - gmx:100527826 186.037
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu11g04449 11 65590197 65591071 Vimu11g04449 11 65590197 65591071 ECH