Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu11g04447 ATGCCTGCAACAACAGAGAACCAAGGCTCATTTCTGGGCCGAATAAGCATACGTAGAAATCAAGTCATGTCCATGGATGGAACCCACGACCAAGAAATGGAAGACCTCGAACTTTTTCAGAAGCACGTCGGAGACCGCTTTTCCGAACTCTTTTCCACCACCACCGAGGACTCCTCCGGCGACGCCCTCCTCTCCATCTCCTGGCTCCGCCGCCTCCTCGACGAGCTCCTCTGCATCGAAGCAGAGTTCAAAGCCGTCCTCCTCATGGGCCGCGACCCCTCTCAGATCGCCAAACCGCCGCTCGACAAGCTCCTCCCAGAGCTCCTCGACCGCTTCGTCAAATCCCTCGACGTCTGCAACGCCGTCGTGCTCGGCCTCGACGCCGTTAAAAACCTCCAGCGCCTCGCCGAGATCGTCGTCGACGCGCTCGAAGTGACGCCGCTGGGCGACGGCCAGGTCCGCCGCGCGAAGAAGGCGCTCTCCGCCCTCATCGCCGCCATGCTGCACGAGGACAACGCCTACGCGAAGGGGACCGAGCGCAACCGGTCCTTCGGGCGGCGCTCCGGGAACTCCGGCTCGAACAGCAAGGACCGGGTGCGGGCGCTGTCGTGGACGATGGCGCGGAACTGGTCGGCGTCGAAGCAGATCCACGCGATGATGTCGAATCTGGCGGCGCCTCGCGGCGCAGAGTCGTCGGGATTGGCGCAGCCTGTTTACATAATGAGCACCGTTCTGGTGTTCGTGATGTGGGCTTTTGTGGCAGCGGTTCCATGCCAGGAGAGGAATGGGTTGGGGACTCACTTTCCCTTACCGAGGCAATTGAACTGGGCCCAGCCCTTGATCGGGTTGCAGGAGAAGATTGCGGAGGAGTGGAAGAAGAAGGAGAAGAAGGGTAACGTGGGATTATTGGAGGAGATGCATAGGATGGAGAAGTTGGGACAGTCGCTGGTTGAGTTCGCTGATTCCTTTCAGTTTCCCCCCGAAACGGAGCGTTTGGATGAAATGAAGAGGAACGTTGAGGACTTAGCCGAAATTTGTAAGAAAATGGACCAAGGGTTGGAACCCATGCAGCAGCAGATTAGGGAGGTCTTTCACAGGATTGTTAGGAGCAGGTCCGAGTTTCTCGTTGTCTTGGACCAAGCTGGCAAGTTGTCTGCACCCGCTGTTTAA 1170 0.5846 MPATTENQGSFLGRISIRRNQVMSMDGTHDQEMEDLELFQKHVGDRFSELFSTTTEDSSGDALLSISWLRRLLDELLCIEAEFKAVLLMGRDPSQIAKPPLDKLLPELLDRFVKSLDVCNAVVLGLDAVKNLQRLAEIVVDALEVTPLGDGQVRRAKKALSALIAAMLHEDNAYAKGTERNRSFGRRSGNSGSNSKDRVRALSWTMARNWSASKQIHAMMSNLAAPRGAESSGLAQPVYIMSTVLVFVMWAFVAAVPCQERNGLGTHFPLPRQLNWAQPLIGLQEKIAEEWKKKEKKGNVGLLEEMHRMEKLGQSLVEFADSFQFPPETERLDEMKRNVEDLAEICKKMDQGLEPMQQQIREVFHRIVRSRSEFLVVLDQAGKLSAPAV 389
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu11g04447 389 MobiDBLite consensus disorder prediction 178 198 - -
Vimu11g04447 389 MobiDBLite consensus disorder prediction 184 198 - -
Vimu11g04447 389 Coils Coil 332 352 - -
Vimu11g04447 389 PANTHER BPS1-LIKE PROTEIN 15 377 - -
Vimu11g04447 389 Pfam Protein ROH1-like 4 377 IPR008511 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu11g04447 Vimu-Chr11 65564616 65566903 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu11g04447 - - gmx:100817717 593.578
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu11g04447 11 65564616 65566903 Vimu11g04447 11 65564616 65566903 ECH