Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu11g04442 ATGGGTGAGAAAGAGTCGGAGAAAGTAGTTTGGGAACCAATGAGAACCTCTGCTGCCACTCTCATTGCACCAACTGCACACCACCGAACCACACCAAAGCTTTTAGTCATTCTCGTCCTCTTTGTCTCCGTCACTTACGTCGTCTACACGCTCAAGCTCGTCGCAACCTCACACGCATGCGGCCACGTTTCATTCCCCACCGCCACCTTCTCCAAAACCGTTCTCGCCGGCAATGCCTCCGTTCTCCGACGGGAGTCCCGCGAAACGAACTCCGACGACCTGACGGACCTCCGCCACGTGGTGTTCGGAATCGCCGCGTCGGCGAAGCTCTGGGAACAGAGGAAGAACTACATCAAGCTCTGGTATCGCCCACGGGAGATGCGCGGCGTGGTGTGGCTTGACGAGAAGGTGAAATTGAGGGAGGATAGGGATGAGCTGCCGCCGATTAGAATCTCCGGCGACACCGAGAGGTTCCGTTACACCAACAAGCAGGGGCACCGGTCCGCCATCAGGATCTCGCGGATCGTGGCGGAGACGCTGAAGCTGGGGATGAAGGATGTGCGGTGGTTCGTGATGGGCGACGACGACACCGTTTTCGTGACCGAAAACCTAATTAGCATTCTGAGGAAATACGACCACAATCAGTTCTACTACATTGGGAGTTTATCGGAGAGTCACTTGCAGAACATTTTCTTCTCTTACAACATGGCTTACGGTGGAGGAGGTTTTGCAATTAGTTATCCTCTCGCCAAGGCTCTGTACAAAATGCAGGATCGCTGCATTCAGCGTTACCCGGGTCTCTATGGTTCTGACGATAGAATGCAAGCGTGTATGGCCGAACTCGGTGTTCCACTCACAAAGGAAATCGGTTTTCACCAGAATTTGACTCCAGTTCAATTCTGTCTACTGGATTTTAATTATCTGCGTTGGCTTGCGGGTGATTTACGCCTCCCAATAACTTCTTATTCGGCTAATAATCATATGATGTCGGCTGCTATGAATATGGACAAGGAATTTGTTTGTAGTCTTGCAAGTGTATACGTTCTTATAACATCCATGCTGATTGCCGCTGATTTATTGGAACAGTATGATGTGTATGGAAACCTGTTTGGCCTTCTGGCATCTCATCCCGTGACTCCATTGGTGTCACTGCACCACCTTGATGTGGTTGAGCCAATCTTCCCCAACGTGACCCGACTGGAAGCCCTTCAACGGCTCACTATACCAATGAAGATTGACTCGCCAGGGCTGATGCAGCAATCCATCTGCTACGACAAATCAAAAGGCTGGACTATTTCCGTTTCGTGGGGTTTCGCTGTTCAGATATTTCGTGGTGTATTTTCACCACGTGAGATTGAAATGCCTTCGAGAACATTCTTGAATTGGTATCGAAGAGCAGATTACACTGCATATGCATTCAACACCCGTCCAGTTAGCCGAAATCCATGCCAGAAGCCTTTTGTATTTTACTTTTCCAACGCAAGATACAGTTCTGCGATGGAAGAAACAGTGAGTGAATATGAAAGGCACCTTGAAGCTCACCCGGAATGCAGGTGGAAGATGGATGATCCGGGTGCTCTTGACAAAGTGAAGGTATACAAGAAGCCAGATCCGAATATGTGGAGTAGAGTAAGTTCTTCTCTGACTCTCATAAGCTCCGAGGAGAAACTGTTGCAGAGTGAGGAGGTCAAAGGAAAAAGAAAAGATGGTGATAGATGTGGGTATGTGCAGAGATGGTGA 1740 0.4931 MGEKESEKVVWEPMRTSAATLIAPTAHHRTTPKLLVILVLFVSVTYVVYTLKLVATSHACGHVSFPTATFSKTVLAGNASVLRRESRETNSDDLTDLRHVVFGIAASAKLWEQRKNYIKLWYRPREMRGVVWLDEKVKLREDRDELPPIRISGDTERFRYTNKQGHRSAIRISRIVAETLKLGMKDVRWFVMGDDDTVFVTENLISILRKYDHNQFYYIGSLSESHLQNIFFSYNMAYGGGGFAISYPLAKALYKMQDRCIQRYPGLYGSDDRMQACMAELGVPLTKEIGFHQNLTPVQFCLLDFNYLRWLAGDLRLPITSYSANNHMMSAAMNMDKEFVCSLASVYVLITSMLIAADLLEQYDVYGNLFGLLASHPVTPLVSLHHLDVVEPIFPNVTRLEALQRLTIPMKIDSPGLMQQSICYDKSKGWTISVSWGFAVQIFRGVFSPREIEMPSRTFLNWYRRADYTAYAFNTRPVSRNPCQKPFVFYFSNARYSSAMEETVSEYERHLEAHPECRWKMDDPGALDKVKVYKKPDPNMWSRVSSSLTLISSEEKLLQSEEVKGKRKDGDRCGYVQRW 579
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu11g04442 579 PANTHER FRINGE-RELATED 30 544 - -
Vimu11g04442 579 FunFam Fringe-related protein-like 87 304 - -
Vimu11g04442 579 Gene3D - 87 306 - -
Vimu11g04442 579 Pfam Protein of unknown function, DUF604 228 293 IPR006740 -
Vimu11g04442 579 Pfam Protein of unknown function, DUF604 360 544 IPR006740 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu11g04442 Vimu-Chr11 65507603 65510752 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu11g04442 6 307 Glycosyltransferase AT4G11350 59.434 1.72e-126 372
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu11g04442 - - gmx:100818244 482.641
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu11g04442 11 65507603 65510752 Vimu11g04442 11 65507603 65510752 ECH