Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu11g04427 ATGGCACGGTTGGTTCTGCCATCCAAGAGATTGTGTCTTTCGAGGAACACTCTACTGGGTTTGATCTCCCCTGCTCCTCTTCAGCTTAATTGCGGTGTTGGATATTTTCAGAATACAGCAAAAAGGAGCATCCGTTACAAGCATTGCGTTGCTTCGGAGGTTAATTTCCAAAAGAAGTATTCCCCATTATATACTTCATTACCAAGGGTCAAGCAAGTAAGTAAGAGGCTAATTTGTGCTGTTGCCACAGAGGATTTACCAAAGCAAGTTGAAGAATCTAATATGGAGACACCAAAGGAAATATTCTTAAAGGATTATAAGATGCCTGATTACTACTTTGACAATGTGGATCTAGAATTTTCCTTGGGAGAGGAGAAGACAATAGTTAGTTCTAAAATATCTGTGTATCCTCGCATTGAAGGTTCTTCCCCCCCTCTAGTTTTAGATGGACAAGATGTAACTTTAGTTTCAGTTCAGCTGAATGGAAAGGCTTTGAAGGAGGAAGATTATCATTTGGATGCACGTCATCTCACAATCCGATCACCTCCTAGTGGTAAATATGATCTCGAAATTGTCACTGAGATCTGTCCACAGAAAAATACATCATTAGAGGGACTTTACAAATCATCTGGGAATTTCTGTACTCAATGTGAGGCTGAAGGTTTCCGTAAAATTACATTTTATCAGGATCGACCTGACATAATGGCAAAATATACAGTTCGAATTGAGGCTGATAAATCACTGTATCCAGTGTTATTGTCTAATGGAAACCTGGTTGAGCATGGTGACCTAGAGGACGGGAGGCATTACACTGTTTGGGTGGACCCCTTCAAGAAACCTTGTTACCTGTTTGCCTTGGTTGCCGGACAATTAGAGAGCAGAGATGACATATTTACTACCCGTTCAGGGCGGAATGTGGTCCTTAGGATATGGACACCTAAAGAAGATGTCCCCAAGACCGCACATGCTATGTATTCTCTGAAAGCAGCTATGAAGTGGGATGAAGATGTTTTTGGACTTGAATATGACCTGGATCTCTTCAATGTTGTTGCTGTCCCAGATTTTAACATGGGAGCAATGGAGAACAAGAGCTTGAATGTTAGACCCCTTCTTATTTTCAATTCAAAGCTTGTATTGGCCTCTCCAGAGACTGCTACTGATGCAGATTATGCTGCAATATTGGGGGTTATTGGACATGAGAGCTTATCTGCTGTCTATTTTGCAGTATTTCCACAACTGGACTGGCAACAGGAATTTTCATCTGATATGGGAAGTCGAACTGTAAAGCGTATTGCTGATGTTTCTAATCTTAGAAATTACCAGTTTCCACAGGATGCCGGTCCCATGGCCCATCCAGTGCGACCACATTCTTATATCAAGGTCTATGAAAAGGGGGCTGAAGTTGTCAGAATGTACAAAACCTTATTAGGAAGTCAAGGGTTCCGAAAATTTGTATTAACTTACAAGCAAATGTTCAGGTATTCTCAAGCTGGGACCCCTGTTGTCAAAGTAAGCACTTCTTATAATTCAGAAGGACATACTTTTTCTTTGAAGATTAGCCAAGAGATACCACCTACTCCTGGACAAGCAGTTAAGGAACCCATGTTCATTCCTGTTGCAGTGGGTTTGCTTGATTCCACCGGCAAGGACATTCCTCTTTCAAATCTTTATCACAACGGGACTCTGCAATCTGTTTCAAACAGTGATCAACCAGTCTTCACTACAGTCCTTAGAAAAGAGGAAGAATTTATATTCACTGATATATTTGAGAAGCCTGTTCCTTCTTTGTTAAGGGGATACAGTGCTCCTGTTCGTCTGGAATCTGATCTCTCTGACAGCGACCTGTTTTTCCTGCTAGCTAATGATTCTGATGAATTCAACCGTTGGGAGGCTGGACAAGTTTTGGCACGGAAATTGATGCTTAAATTGGTGGATGATTTTCAACATAACAAACCATTGGTTTTGAATCCCAACTTTGTTGATGGGTTCAAACGTATTCTATCTGACCCAAGTCTGGACAAAGAATTTGTGGCAAAGGCAATAACTCTGCCCGGGGTAGGAGAAATAATGGACATGATGGAGGTTGCAGATCCAGATGCTGTTCATGCTGTTCGTACTTTCATCAGGAAACAGCTTGCCAGTGAACTGAGATCAGAATTCCGCACAACAGTATTATATAATAGGAGCTCGGAACATTATGTTTTTGATCACCCAAACTTGGCCAGGCGTGCTCTGAAGAATATTGCTCTTGCTTATCTTGGATGCCTCGAGGATCAAGAACTCACCGAGCTTGCAATTCAAGAGTACAAAACTGCCACAAACATGACTGAACAATTCGCCGCTTTGGTTGCCATAGCCCAGACACCCGGTAAAACCCGTGATGATTTTCTAGCTGATTTTTACGGAAAGTGGGAGCATGATTTCTTGGTGGTGAACAAATGGTTTGCTCTGCAATCATCGTCTGATATTCCTGGTAATGTCGAGAATGTGCGGAAACTGCTAGACCACCCAGCATTTGACCTGCGCAATCCCAACAAAGTGTACTCTCTCATTGGAGGTTTCTGTGGGTCTCCAGTGAACTTTCATGCGAAGGATGGATCAGGCTACAAGTTTTTGGGAGAAATTGTACTGCTACTAGACAAGCTAAATCCTCAGGTTGCCTCAAGAATGGTGTCAGCCTTCTCAAGATGGAAGCGTTATGACGAAAGCAGACAAAAGCTTGCGAAGGCACAATTGGAGAAGATCGTGTCTTGTAATGGACTGTCGGAGAATGTGTATGAGATAGCCTCGAAAAGCTTAGCTGTTTGA 2808 0.4227 MARLVLPSKRLCLSRNTLLGLISPAPLQLNCGVGYFQNTAKRSIRYKHCVASEVNFQKKYSPLYTSLPRVKQVSKRLICAVATEDLPKQVEESNMETPKEIFLKDYKMPDYYFDNVDLEFSLGEEKTIVSSKISVYPRIEGSSPPLVLDGQDVTLVSVQLNGKALKEEDYHLDARHLTIRSPPSGKYDLEIVTEICPQKNTSLEGLYKSSGNFCTQCEAEGFRKITFYQDRPDIMAKYTVRIEADKSLYPVLLSNGNLVEHGDLEDGRHYTVWVDPFKKPCYLFALVAGQLESRDDIFTTRSGRNVVLRIWTPKEDVPKTAHAMYSLKAAMKWDEDVFGLEYDLDLFNVVAVPDFNMGAMENKSLNVRPLLIFNSKLVLASPETATDADYAAILGVIGHESLSAVYFAVFPQLDWQQEFSSDMGSRTVKRIADVSNLRNYQFPQDAGPMAHPVRPHSYIKVYEKGAEVVRMYKTLLGSQGFRKFVLTYKQMFRYSQAGTPVVKVSTSYNSEGHTFSLKISQEIPPTPGQAVKEPMFIPVAVGLLDSTGKDIPLSNLYHNGTLQSVSNSDQPVFTTVLRKEEEFIFTDIFEKPVPSLLRGYSAPVRLESDLSDSDLFFLLANDSDEFNRWEAGQVLARKLMLKLVDDFQHNKPLVLNPNFVDGFKRILSDPSLDKEFVAKAITLPGVGEIMDMMEVADPDAVHAVRTFIRKQLASELRSEFRTTVLYNRSSEHYVFDHPNLARRALKNIALAYLGCLEDQELTELAIQEYKTATNMTEQFAALVAIAQTPGKTRDDFLADFYGKWEHDFLVVNKWFALQSSSDIPGNVENVRKLLDHPAFDLRNPNKVYSLIGGFCGSPVNFHAKDGSGYKFLGEIVLLLDKLNPQVASRMVSAFSRWKRYDESRQKLAKAQLEKIVSCNGLSENVYEIASKSLAV 935
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu11g04427 935 FunFam Puromycin-sensitive aminopeptidase 610 934 - -
Vimu11g04427 935 FunFam Aminopeptidase N 108 291 - -
Vimu11g04427 935 Gene3D - 610 934 IPR037144 -
Vimu11g04427 935 Pfam Peptidase family M1 domain 325 401 IPR014782 GO:0008237|GO:0008270
Vimu11g04427 935 Pfam Peptidase M1 N-terminal domain 118 283 IPR045357 -
Vimu11g04427 935 CDD M1_APN 105 483 - -
Vimu11g04427 935 FunFam Aminopeptidase N 498 609 - -
Vimu11g04427 935 PANTHER PUROMYCIN-SENSITIVE AMINOPEPTIDASE 493 934 IPR012779 GO:0008270
Vimu11g04427 935 SUPERFAMILY Metalloproteases ("zincins"), catalytic domain 301 499 - -
Vimu11g04427 935 Pfam Domain of unknown function (DUF3458_C) ARM repeats 612 934 IPR024601 -
Vimu11g04427 935 SUPERFAMILY Leukotriene A4 hydrolase N-terminal domain 98 289 IPR042097 -
Vimu11g04427 935 Pfam Domain of unknown function (DUF3458) Ig-like fold 498 608 IPR035414 -
Vimu11g04427 935 Gene3D tricorn interacting facor f3 domain 108 291 IPR042097 -
Vimu11g04427 935 FunFam Putative aminopeptidase N 293 381 - -
Vimu11g04427 935 Gene3D Neutral Protease Domain 2 407 501 IPR027268 -
Vimu11g04427 935 Gene3D - 293 381 - -
Vimu11g04427 935 Gene3D - 502 608 IPR038438 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu11g04427 K01256 - gmx:100775476 1548.87
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu11g04427 11 65362364 65371486 Vimu11g04427 11 65362364 65371486 ECH