Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu11g04426 ATGAGAGGGACTCATGCGACTGATGCTAACAACACTTTCGACACTATTAACGCTGCTGCTTTTGCCATAGCCTCTGCTCCCCACAATCGCCTTTCTCAACCTCCTACCCAGAAGAAAGGATGGGGAAGCTGGTTGAGCAAAATTGGGTGTTTTGGATATCAAAGAAACAGAAAGCGCATTGGACATGCGATCCTTGTTCCAGAAACAGCCAGCAATGGAGCTGATCCTGCCGGAGCTGTCAGTTCAACACAAGCAGCAAGCATAACACTCCCCTTCGCCGCCCCTCCGTCATCTCCGGTATCTTTCTTTCAATCAGAACCTCCCTCAACCGCACACTCACCGGTTGGTAAAATCTCTCACACTTGTATCTCTGCCAGCATGTACTCTCCTGGTGGTCCTGCTTCGATCTTTGCCATTGGCCCTTTTGCTCATGAAACCCAATTAGTATCACCACCTGTTTTCTCGGCTTCATCCACCGCTCCTTTCACCCCACCTCCTGAATCTGTCCACTTGACCACCCCTTCTTCGCCGGAGGTTCCATTTGCTCAGCTTCTTGACCCCAAAAACAGGAATTCCGACACCTTTCACCGCTTCCAAATATCTCACTACGACTTCCAGTCCTATCAGTTTCACCCCGGAAGTCCAGTCGGTCAACTCATATCACCCAGATCCGCCATCTCTGCCTCCGGCGCCTCATCGCCGCTCCCTGACTCTGAAATTAATGCCACTCTCTCCCATATTCTTGATTTCCAAAGACCAGACCCTCCCAAGCTTCTCGGCATTGATAAACTTTCTGCTTATGAAAACAGGAAGTCAAACCAAGGTTCCGGCTCTCTCACCCCTGATGCTGCAAGGTCTACAACTCAACCCGGTTTTCTTTCAAATCATTGGGTTTCTGAGATCAAAATGTCCCCACGTCCAAGCAACAATCGGGTTAATGAGATCAGTATAAATCATAGAGTTTCATTTGATATATCTGCCCAGAAAGTTTTGGAATCTCTGGAAAACAACCCAGCAGCATCGGCATGGACTAAGGTCATGTCGAAATTGAAAAACGATTCTCCAACAGCAGCAGACAAAGAAGATAATTTTGGAGAAACCGGGTGCAATGAGAAACAAGTCCTTGCTGAAACTCACGGTGATCAACCGCTGGAAACCAATTTGAGCGGAGATGATGCAAGAGTTCACGAGAAGGATGAGTCCTTAACTTGTGCAAAAGAATTCAATTTTGATAAAGCAGATGGAGGGGATTCTCTTGCTCCCAATATAGTTGCTGACTGGTGGGCTAATGAGAAAGTTGCAGGGAAGGAGAGAGGGGCCACCAAAGATTGGTCCTTTTTCCCAATGATTCAACCTGGTGTCAGCTAA 1368 0.4766 MRGTHATDANNTFDTINAAAFAIASAPHNRLSQPPTQKKGWGSWLSKIGCFGYQRNRKRIGHAILVPETASNGADPAGAVSSTQAASITLPFAAPPSSPVSFFQSEPPSTAHSPVGKISHTCISASMYSPGGPASIFAIGPFAHETQLVSPPVFSASSTAPFTPPPESVHLTTPSSPEVPFAQLLDPKNRNSDTFHRFQISHYDFQSYQFHPGSPVGQLISPRSAISASGASSPLPDSEINATLSHILDFQRPDPPKLLGIDKLSAYENRKSNQGSGSLTPDAARSTTQPGFLSNHWVSEIKMSPRPSNNRVNEISINHRVSFDISAQKVLESLENNPAASAWTKVMSKLKNDSPTAADKEDNFGETGCNEKQVLAETHGDQPLETNLSGDDARVHEKDESLTCAKEFNFDKADGGDSLAPNIVADWWANEKVAGKERGATKDWSFFPMIQPGVS 455
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu11g04426 455 PANTHER HYDROXYPROLINE-RICH GLYCOPROTEIN-LIKE 8 455 IPR040420 -
Vimu11g04426 455 MobiDBLite consensus disorder prediction 270 291 - -
Vimu11g04426 455 MobiDBLite consensus disorder prediction 156 179 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu11g04426 Vimu-Chr11 65355262 65357370 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu11g04426 - - vra:106768529 803.512
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu11g04426 11 65355262 65357370 Vimu11g04426 11 65355262 65357370 ECH
Vimu7g02442 7 20918971 20921022 Vimu11g04426 11 65355262 65357370 PCT