Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu11g04419 ATGTGGTTTCTCGGTTGGAAAGGGGCGTCGGGGTTCTCAGCCTCTTCCACAGCCGAACAAGTCACTCAAGGGATTGATGGAACCGCTCTCACCGCCATTGTCACAGGAGCATCAAGTGGTCTTGGCCTGGAGACGACCCGGGTTCTTGCATCCCGCGGTGTCCATGTTGTCATGGCAGTAAGGAATGTGGACAGTGGTAAGAATGTCAAAGAAACTGTTCTTAAGGAAATTCCCTCGGCTAAAATTGATGTTATGGAGTTAGATCTAAGCTCTATGGCATCGGAAGAAGGAGTGGAAATAACTGTCAACTCCCTTCATCCTGGATCAATTGTTACAAATATTTTGCGATACCATGGTTATGTTAATGCCCTTGCTAATATGGTGGGCAAGTACTTCCTTAAAAATGTTCAACAGGGAGCTGCAACTCAGTGTTACGTGGCGTTGCATCCACAAGTGAAGGGAGTATCTGGTGAATACTTTATGGATTGCAATAAGGCCGACCCAACCTCTCTGGCTAAAGATTCAGAGCTGGCAAAAAAACTATGGGAATTCAGCTCAAGTCTGACTAATCCAAAGTAG 579 0.4611 MWFLGWKGASGFSASSTAEQVTQGIDGTALTAIVTGASSGLGLETTRVLASRGVHVVMAVRNVDSGKNVKETVLKEIPSAKIDVMELDLSSMASEEGVEITVNSLHPGSIVTNILRYHGYVNALANMVGKYFLKNVQQGAATQCYVALHPQVKGVSGEYFMDCNKADPTSLAKDSELAKKLWEFSSSLTNPK 192
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu11g04419 192 Gene3D - 96 192 - -
Vimu11g04419 192 Gene3D - 18 95 - -
Vimu11g04419 192 PANTHER RETINOL DEHYDROGENASE 97 189 - -
Vimu11g04419 192 Pfam short chain dehydrogenase 31 94 IPR002347 -
Vimu11g04419 192 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 31 151 IPR036291 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu11g04419 Vimu-Chr11 65296590 65299236 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu11g04419 32 114 Lipid Metabolism Gene Families AT1G24470 28.916 9.56e-08 49.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu11g04419 - K19329 ghi:107907962 223.787
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu11g04419 11 65296590 65299236 Vimu11g04419 11 65296590 65299236 ECH