Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu11g04409 TCTTTGGATTCATCAATGGGACAAGAGTTGGAGCTGGATCTTGATGACAAGTCTTCAGTGGGTCTGAGTCCAAATACTGTGCTTCCATCTCATCAATACTGTGTGAATGTGAAGAAGATATCAAAGAAAGGGAAACCCTCTGGAAAAGATGAATTTTTCACTCTCAAGGAGGGCTTTGCTGAGATCAAATTTGCTCGCTTCCGCAGTTCTTCGTGTAAGAATCATCTCTCTAAACCTCATGGATTGGAAGGTAATATAGAAACCAGGCCTACTTCCATGTATCGGAGTTCAGAAGAAGTGAAAAGCAGAAAGAAAATGGGCACCATGATAGAGGGCAGGAAAAAGATAGAAATTTCAAGAAGAAGTGACGCCTCCTTCACAGGTAGCATTGTTGATTCGTTGTGTGGTTCAGATGATGAAGGTTCTGGGGTTAGATCTCCAGATAGCTTTATTGAAATTTGTATAAATTCAGATGTTAAAAATAAGAACACTATCACAGCACGAGGGAGAGATTCTACAAATTTGAAGCCCAGAAGTGATAAAGTTGCTGATTCTGTAATCAATGGCAATTGTTGTGTTGAAAAGGACACGGTTCACTCGCTTCATAAGTCGTTCTCGGCTAAGGCAGAAGTCTCTCAATTGCCATCTCCATTGGGAAGTGATTGCTCATCAAGCGCAAGTCCAAAAGTCCAATTCATCCATAGCAGGAAAAGGCTGAATCACTTCACAAAGTCAAAATCACTGAGAAGTCCAGTGAGTCAGGTACCGGAGAGTAATGATATCAAATCAAACGAGAAAGCAAACATTGCAAGAAATAGGACTTATCAGAAATCACTGTTAAATGACTTTTCCAAAACAGGAAAGCATTCTGATATCATTTCTGAGTTTATCAACAGAGAAATCCAGTATTCAGGTATAGCTTCTTCACCAGTTCACCTGCATGGCAATCTCAAGTTGGAAAATAAACATGGAGTGCCGTTTTTTGAGTTCAAGGTGAAGTGCCCTGAAGATGTGTTTGTGGCCAAGACATGGAGAACGGGTAATGCTTTCAACTGGGTATATACCTTTCATTCCATTGATAATAGAAAGAAGAGCAATGCTACTGGGTTGGGATACCATGATTTTGACAAAGATTCCTCAACAGTTGCACAGATGCTAGTTTCAGGTAATTTATGTTCCGAACTAGAAGGCAGAGTATTTGACAACTCCATGGTAACAGAATTTGTGTTATACGATTTTACACACTCAAGACAAAGCGTTTCGCATGAGAAGAAGTCTTGCAATGAACCAGATGCTTCTAAAACTCTGAAAGCTTCCCATATTGGATGGAAGGAAGAAACTATGAGGTTGGATGAGAACCGTGCAGTCAAAAACAAACCTCAAGATAAATCTCCACTGAGCAATGTTGAATTTAATGATTTAAGTTCTTTTCCTTGCTCCTCCGCAGAATGCCATTTAAACCTTGAAATTGCTGCCATTGTCTTGCAAATTCCGTTTTCCAAGAGAGAAAGCTTGAAGTACAAAAGAGGGGACATGATGAGTGGTAAAGAACATTCCAACATAAGAGATCTATCTGCCGAAATAGATAAAAAGAGTCTTCATCACAGCAAAATCCAGGAACAGGTGAAGGTGGTAATACCAACTGGTAATCATGGTTTGCCAAATGCTGAAAGCCAGGGACCCTCATCGTTACTTGATCGACTGCGACATGGTGGAGGTTGTGACTGTGGTGGTTGGGACATGGCCTGTCCCCTTATTCTTTTAGGCAATCCTAGTATTCAATTTGCTGAGGACTGCCCACTTTTTGAGGAACATCAACCATTGGAACTTTTTGTTCAGGGAGCAAAAGGAAGCAGTCCTACCTTCAGCATGACAAGAATTGAAGAGGGGCATTATGCTGTTGATTTTCATGCACAGCTATCTGCTTTACAAGCATTCTCAATCTGTGTTGCCATCTTGCATGGAACTTCGACCTCCAGCGGTGGAGGGCATGAGAAAAACCAGCAGTCATCTCAATGCAGTTCACTGAAAATGCTTCTTGAGGAGGATGCAGATTTTATTTTCAAATCAGTCACAACTGAGAAGAAGACTCGTTGCAAGAATCCAAAAGTAGCTCCTCGATCCTATGTGCTGAATCCACCCTTTTCTCCTATTGCACGTGTATAA 2166 0.4104 SLDSSMGQELELDLDDKSSVGLSPNTVLPSHQYCVNVKKISKKGKPSGKDEFFTLKEGFAEIKFARFRSSSCKNHLSKPHGLEGNIETRPTSMYRSSEEVKSRKKMGTMIEGRKKIEISRRSDASFTGSIVDSLCGSDDEGSGVRSPDSFIEICINSDVKNKNTITARGRDSTNLKPRSDKVADSVINGNCCVEKDTVHSLHKSFSAKAEVSQLPSPLGSDCSSSASPKVQFIHSRKRLNHFTKSKSLRSPVSQVPESNDIKSNEKANIARNRTYQKSLLNDFSKTGKHSDIISEFINREIQYSGIASSPVHLHGNLKLENKHGVPFFEFKVKCPEDVFVAKTWRTGNAFNWVYTFHSIDNRKKSNATGLGYHDFDKDSSTVAQMLVSGNLCSELEGRVFDNSMVTEFVLYDFTHSRQSVSHEKKSCNEPDASKTLKASHIGWKEETMRLDENRAVKNKPQDKSPLSNVEFNDLSSFPCSSAECHLNLEIAAIVLQIPFSKRESLKYKRGDMMSGKEHSNIRDLSAEIDKKSLHHSKIQEQVKVVIPTGNHGLPNAESQGPSSLLDRLRHGGGCDCGGWDMACPLILLGNPSIQFAEDCPLFEEHQPLELFVQGAKGSSPTFSMTRIEEGHYAVDFHAQLSALQAFSICVAILHGTSTSSGGGHEKNQQSSQCSSLKMLLEEDADFIFKSVTTEKKTRCKNPKVAPRSYVLNPPFSPIARV 721
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu11g04409 721 MobiDBLite consensus disorder prediction 81 106 - -
Vimu11g04409 721 PANTHER EXPRESSED PROTEIN 11 141 - -
Vimu11g04409 721 Pfam Domain of unknown function (DUF3527) 310 655 IPR021916 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu11g04409 Vimu-Chr11 65229392 65232378 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu11g04409 - - gmx:100811734 1154.43
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu11g04409 11 65229392 65232378 Vimu11g04409 11 65229392 65232378 ECH
Vimu7g02445 7 20930012 20932451 Vimu11g04409 11 65229392 65232378 PCT