Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu11g04401 ATGCTTTCTCCTTCAACCACTCGCATCTTCATCCACACAACAACTGCTATAAGATTAGCTTCTTCTTCCTCCTCCTCTCTTCGATTTCTCTCCAACCCTACCCTCTTCCGCCCTGTTTTTCACGCTTATTTCAAACCGCTTCCTTCAACCTCATCCACCTCTTTGTTCTCCTCCTCGAGAACCGATCACACTATGGCCACCTCAAGCGCCAAATCAGTCCACGATTTCACTGTTAAAGTTGATGTGAATGGTGACAGTGCTGATCCACTCTACAAGTATCTAAAATCAAGCAAAGGTGGACTCTTCGGGGATAATATCAAATGGAACTTCTCCAAGTTCCTTGTTGATAAGGAGGGGAAGGTTGTTGATCGCTATGCACCCACAACTTCTCCTCTGAGCATTGAGAAGGACTTGTTGAAGTTGTTGGATGCTTGA 435 0.4529 MLSPSTTRIFIHTTTAIRLASSSSSSLRFLSNPTLFRPVFHAYFKPLPSTSSTSLFSSSRTDHTMATSSAKSVHDFTVKVDVNGDSADPLYKYLKSSKGGLFGDNIKWNFSKFLVDKEGKVVDRYAPTTSPLSIEKDLLKLLDA 144
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu11g04401 144 ProSiteProfiles Glutathione peroxidase profile. 79 144 IPR000889 GO:0004602|GO:0006979
Vimu11g04401 144 Gene3D Glutaredoxin 56 144 - -
Vimu11g04401 144 PANTHER GLUTATHIONE PEROXIDASE 66 142 IPR000889 GO:0004602|GO:0006979
Vimu11g04401 144 SUPERFAMILY Thioredoxin-like 75 143 IPR036249 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu11g04401 Vimu-Chr11 65157911 65159736 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu11g04401 K00432 - gmx:100527421 124.79
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu11g04401 11 65157911 65159736 Vimu11g04401 11 65157911 65159736 ECH