Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu11g04337 ATGCCGGAAGAGGATTTGGTTGACATCAAGTTTAGGTTGTACGATGGCTCCGACATCGGACCCTTTAGGTATTCATCCGCCGCCACCGTCGATATGCTTAAGCAGAGGATTGTCTCCGATTGGCCCAGAGGTAAAAACCAGTGCCCAAGGCTAGCAACTACCAGAAAAGTTGAGGCAAGGAAATCTGAACTGGTCAGCTGTGAATATGGATGGGATGCACTGTCATCCAGTAAAACGGTTGTGCCAAAGTCAGCTAATGAAGTGAAATTGATTAATTCTGGTAAAATCTTGGAAAACAACAAGACTGTTGGTCAATGTAAAGTACCTTTTGGTGAAATTGCTGGGAGTGTTATAATAATGCATGTTGTTGTACAGCCATCTCTAGCTAAAACTAAAGCTGGATCATTTTCAGTTGATGGGGAAGGAAGAGTTGTTGGTTTTGACTTTGGCACCAAAATTGTAAACTCAAGGCTAGGAAGGACTAGAGCCTTAAATGAGTTTCCTTATCTTGCAAATTGTCCTCGAGATAAGGTTGTTTGA 540 0.4241 MPEEDLVDIKFRLYDGSDIGPFRYSSAATVDMLKQRIVSDWPRGKNQCPRLATTRKVEARKSELVSCEYGWDALSSSKTVVPKSANEVKLINSGKILENNKTVGQCKVPFGEIAGSVIIMHVVVQPSLAKTKAGSFSVDGEGRVVGFDFGTKIVNSRLGRTRALNEFPYLANCPRDKVV 179
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu11g04337 179 Pfam Ubiquitin-2 like Rad60 SUMO-like 6 134 IPR039540 -
Vimu11g04337 179 PANTHER UBIQUITIN-LIKE PROTEIN 3 HCG-1 PROTEIN 1 133 IPR040015 -
Vimu11g04337 179 Gene3D - 1 133 - -
Vimu11g04337 179 CDD Ubl_MUBs_plant 6 126 - -
Vimu11g04337 179 SUPERFAMILY Ubiquitin-like 2 130 IPR029071 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu11g04337 Vimu-Chr11 64700337 64706261 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu11g04337 - - gmx:100810070 177.563
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu11g04337 11 64700337 64706261 Vimu11g04337 11 64700337 64706261 ECH