Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu11g04335 ATGGCCATGCATCGCGAGTCTTGGGCTTTTGTATTCGGTCTTTTGGGCAACATCATCTCCTTTGGAGTGTTTCTTGCTCCATTGCCAACCTTTTACCAAATCTTCAAGAAGAAATCAACTGAAGGGTATCAGTCACTTCCTTACGTTGTTGCACTGTTCAGTGCAATGCTCTGGATTTACTATGCATTCGTGAAAAGGGAAGCTGCTCTTCTTCTCATTACCATTAACACGTTTGGAATTGTTGTGGAATCAATTTACCTTACAATCTTCCTAATTTACGCTCCAAGGAAGCCTAGGCTTACGACCATCAAGCTTCTTCTCTTGCTGAATGTGTTTGGCTTCGGAGCCATGCTTCTGGCAACTCTCTACCTGTCCAAGGGAGCAAAGCGTCTTGCCATCATAGGATGGATTTGTCTTGTTTTCAACATCAGTGTCTTTGCTGCACCTCTCTTCATTATTAGGCGAGTGATTAAGACAAGGAGCGTGGAATACATGCCATTTACCTTGTCCATGTTTTTGACCATCAATGCTGTTATGTGGTTCTTCTACGGCCTTCTTCTCAGGGATTATTATGTTGCTCTCCCAAACACACTTGGGTTTCTGTTCGGCATAATTCAGATGGTGATGTATTTGATGTACAGAAACGCCACCCCAGTTGCACTAGATGAGCCGGTGAAGGCTCAAGAAGCGAATGGCCACATAGTTGGAGCTGTGAAGATGGGAACAATAGAGCCAAACCATGGAGGTGCTGGTCTTGGTGGTGTTGGCAAAGTCTGA 777 0.4466 MAMHRESWAFVFGLLGNIISFGVFLAPLPTFYQIFKKKSTEGYQSLPYVVALFSAMLWIYYAFVKREAALLLITINTFGIVVESIYLTIFLIYAPRKPRLTTIKLLLLLNVFGFGAMLLATLYLSKGAKRLAIIGWICLVFNISVFAAPLFIIRRVIKTRSVEYMPFTLSMFLTINAVMWFFYGLLLRDYYVALPNTLGFLFGIIQMVMYLMYRNATPVALDEPVKAQEANGHIVGAVKMGTIEPNHGGAGLGGVGKV 258
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu11g04335 258 Gene3D - 11 97 - -
Vimu11g04335 258 PANTHER RAG1-ACTIVATING PROTEIN 1 14 217 IPR047664 -
Vimu11g04335 258 FunFam Bidirectional sugar transporter SWEET 10 99 - -
Vimu11g04335 258 FunFam Bidirectional sugar transporter SWEET 130 222 - -
Vimu11g04335 258 Pfam Sugar efflux transporter for intercellular exchange 133 216 IPR004316 GO:0016020
Vimu11g04335 258 Pfam Sugar efflux transporter for intercellular exchange 11 97 IPR004316 GO:0016020
Vimu11g04335 258 Gene3D - 129 220 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu11g04335 Vimu-Chr11 64675652 64677434 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu11g04335 1 245 Miscellaneous Gene Families AT5G50800 56.504 1.15e-96 283
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu11g04335 K15382 - gmx:100805676 453.366
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu11g04335 11 64675652 64677434 Vimu11g04335 11 64675652 64677434 ECH