Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu11g04332 ATGTCGTTGCCGCCGCCGCCGGCAAATTCAGATTCCGCCGATACCTCTGCTCCGTCGCTGGTCAGAACTTATCGCGTCTGGCAAGGCAGTAACGTAAAGTTCGATTCCGAGTTCTCTGTGTCAATCAACACCGAGTTGATTCGGGAGCATGCGGATACCAAAAAGACTCTAGAGTTTCTGGTTTTTCTTTTCGGAGGGAGACTCATATTTGGGCCTGATGTGAAATCAATATTTATATCGGTTTTTCTTATTATTGTTCCCATCGCGGTGTTCTGTGGTTTGGTAGCGAGGAAATTGTTGGATGATTTTCCTCATCACTCTGGATGGTCAATAATGGGTGTGGTTATCGCTCTCACACTGTTTGTTCTAATCACCCTTATAGTAACCTCAGGAAGAGATCCTGGCATAGTACCTCGTAATGCTCATCCTCCGGAGCCAGATGACTATAATTGGACTGAGAATAGCAACAATGGGCAAATTTCAACGTCACGATTTCCACGGACAAGGGATGTAATTGTCAATGGTATAACAGTGAAAGTCAAATATTGTGATACTTGCATGCTCTACAGACCCCTCCGTGCTTCTCACTGTTCTGTCTGTGATAACTGCGTAGAGCGATTTGATCATCACTGCCCATGGGTGGGTCAGTGTATTGGACTGCGAAATTACCGGTTCTACTACATGTTTGTTTTCTCAGCCACTCTGCTTTGCTTGTATGTACATGCCTTTTGCTGGGTTTACATTGTAAGGATCAAGGACTTCGAGAAAATATCAATTTGGAAAGCAATGTCCAAAACTATAGCATCCACTGCACTAATCATCTACACCTTCGTTTGTGTCTGGTTTGTTGGCGGCCTCGCTGTTTTCCACACGTACCTCATCAGCACAAACCAGTCTACTTACGAAAATTTTAAATACCGGTATGACCCTCAAACCAACCCATACAACAGAGGGATATTGAACAACTTCAAAGAAGTGTTATGCTCTAGGATTCCTCCGTCCAAGAACAATTTCAGGTCTAAGGTTCCAAGGGAGCCATTAGATTCATATCGAAGAACGGACTTCAGGCCCTTAAGCCCATTGATGAAAAGAGCCACCGGGCATATGGAATTATTAGTTGGGAATTCAGTTTATAATGAGCATGAAGAGGAGGAAAGTTATCCTAGAGATGGGTCTGAGAATGAAGCACGTAGCAAGGATAGTGAAAGCAAAGACAGTGGATTGACCGATAAGTCCGTGGATTTAAGCAGGATCTTTCACACTGAAGGAGTAGAGGGCCAAGAAAGTTCAGTTGGCAGACACCCTCCATGGGAAACAACTCCACAAGTTCCTGATAGGATAATCGAAGTTGGGGAATCAAATTGGACTACTGGGCCCAGATACTCCACTCAAGAGACTGTATAG 1404 0.443 MSLPPPPANSDSADTSAPSLVRTYRVWQGSNVKFDSEFSVSINTELIREHADTKKTLEFLVFLFGGRLIFGPDVKSIFISVFLIIVPIAVFCGLVARKLLDDFPHHSGWSIMGVVIALTLFVLITLIVTSGRDPGIVPRNAHPPEPDDYNWTENSNNGQISTSRFPRTRDVIVNGITVKVKYCDTCMLYRPLRASHCSVCDNCVERFDHHCPWVGQCIGLRNYRFYYMFVFSATLLCLYVHAFCWVYIVRIKDFEKISIWKAMSKTIASTALIIYTFVCVWFVGGLAVFHTYLISTNQSTYENFKYRYDPQTNPYNRGILNNFKEVLCSRIPPSKNNFRSKVPREPLDSYRRTDFRPLSPLMKRATGHMELLVGNSVYNEHEEEESYPRDGSENEARSKDSESKDSGLTDKSVDLSRIFHTEGVEGQESSVGRHPPWETTPQVPDRIIEVGESNWTTGPRYSTQETV 467
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu11g04332 467 ProSiteProfiles DHHC domain profile. 181 231 - -
Vimu11g04332 467 MobiDBLite consensus disorder prediction 377 418 - -
Vimu11g04332 467 Pfam DHHC palmitoyltransferase 180 306 IPR001594 GO:0016409
Vimu11g04332 467 PANTHER ZINC FINGER DHHC DOMAIN CONTAINING PROTEIN 81 345 - -
Vimu11g04332 467 MobiDBLite consensus disorder prediction 377 467 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu11g04332 Vimu-Chr11 64643853 64647811 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu11g04332 114 343 Lipid Metabolism Gene Families AT4G22750 29.167 9.49e-15 73.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu11g04332 - - gmx:100788304 714.916
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu11g04332 11 64643853 64647811 Vimu11g04332 11 64643853 64647811 ECH