Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu11g04308 ATGGCAGAAGAATCAGCAGAGAAAATCTGTGAAGGTGTCTCTGAGTCTCCAACTACTACCCCAGTTGGAGGACAGACAACACGAAGAATCAAAGCCACGAGACACCCTCGATGGACCAGACAAGAAACTCTTGTTCTGATAGAGTCTAAGAAAATGGTGGAAAGTGGGGAACAAGGTTGTCGGTTTAGATCAGCTTCAGGGTTCATCCAAAGCGATCCCAAATGGGAGATGGTGTCATCGTTTTGTCAGCAACGTGGGGTGAAGAGAGGGGCGGTTCAGTGCAGGAAAAGATGGGGCAATCTCCTCACTGATTTCAGGAAGATAAAAAAGTGGGAATCGGGGGTGAAGGAGGAGAGTGAGTCGTTTTGGATCATGAGAAATGATGTGAGGAAGGAAAAGAAACTTCCGGGTTTCTTTGACTCGGTGGTGTACAATGTGTTGGATGGAGGGGTGTGCACCACTGTTGCATTTCCCTTGACACTGGTGAAGATGGTGCCCAAAGTGGAGAATGGTTTTGCTGAGGTGGTGGGTCCGGAACAATGCAAGGAGAATGGGGAGGAAGAAGAAGAGGAGGAGGAGGATGAGGCCATCGTCGATAGTGAGAAAATGAGTTGGAGCACCGAAGAGGAGAATGTGGAGACCAGCGTAGCTGCAAATATGGCCAATGGTCTTTTGAAAGTGCCACCAGGTTTCAAGGAGAAAGAGATCACCGGGAGTCTCAGAAACACCCCCTTACTCTCAATGCCTACTCAAGAGAAGCAGCAGCAGCATCAGCAGCCGCCATCTTGCCAAGGGAACTATGATCCTTGCTTTCAAAGGGAACCTGTGTTTCAGCATGGATACAAGAGAAAGCGGTTATCATCGGACAGTAGTGAGGACAACACAGATTTCGACAACAGTATTACCAAAGTGCTTAGGAGAAACAGTGAGATACTGAAAGCCCATCTTGGAGCTCAGAACATAAATTATGAATTGGCCAGGAACCAGCAGAAGCAGCAAACTGACATCTTAGTTGCAGCCCTTGGCAAGCTCACCGATGCTCTCACAAAGATTGCTGACAAGCTGTAA 1068 0.4803 MAEESAEKICEGVSESPTTTPVGGQTTRRIKATRHPRWTRQETLVLIESKKMVESGEQGCRFRSASGFIQSDPKWEMVSSFCQQRGVKRGAVQCRKRWGNLLTDFRKIKKWESGVKEESESFWIMRNDVRKEKKLPGFFDSVVYNVLDGGVCTTVAFPLTLVKMVPKVENGFAEVVGPEQCKENGEEEEEEEEDEAIVDSEKMSWSTEEENVETSVAANMANGLLKVPPGFKEKEITGSLRNTPLLSMPTQEKQQQHQQPPSCQGNYDPCFQREPVFQHGYKRKRLSSDSSEDNTDFDNSITKVLRRNSEILKAHLGAQNINYELARNQQKQQTDILVAALGKLTDALTKIADKL 355
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu11g04308 355 PANTHER TRIHELIX TRANSCRIPTION FACTOR ASR3 17 355 - -
Vimu11g04308 355 ProSiteProfiles Myb-like domain profile. 37 102 IPR001005 -
Vimu11g04308 355 MobiDBLite consensus disorder prediction 1 32 - -
Vimu11g04308 355 Gene3D - 38 107 - -
Vimu11g04308 355 Pfam Myb/SANT-like DNA-binding domain 36 125 IPR044822 -
Vimu11g04308 355 MobiDBLite consensus disorder prediction 179 205 - -
Vimu11g04308 355 MobiDBLite consensus disorder prediction 183 198 - -
Vimu11g04308 355 MobiDBLite consensus disorder prediction 12 27 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu11g04308 Vimu-Chr11 64446272 64448081 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu11g04308 - - gmx:100793052 512.301
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu11g04308 11 64446272 64448081 Vimu11g04308 11 64446272 64448081 ECH