Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu11g04291 TTGCACATTCCACTGAAAAATAGCCATGGCAATGGCTTCAACCACTGCTTTTTCCAGTGCAAACTTCAAGCTTTTTCATTGCGCAAACATGGTTTCAGAGTAGACCCTTTAGGTTCCTTACTCCCACAACTCATAAACATCACATTTCACTCACACCCTTATCTTCATCTTCTTCTTCTTCTTCTCTTACTGAATAAAGCTGCACTTGCACGGTTGCACCACATTCACATCTTATCTCTCGTCTTATTCTCATTTTCTTTCCCTTCCATTGCATTTTCTACTCTCAGTTTGCACTGTCTGGGAGGAACAATGGAACATAACAGTAATAGGACAAACATCAAAAGCACTATTCTTCACCATCTCTTCCAGAAGGAGCGACAGAGCCCTTATTATGACAATCTATGTCGCCCTGTTTCAGATTTGCTTCCTTTCATTGACAATGGGATCAGAGGTGTCACCACCAACCCAGCGATTTTTGAGAGAGCTATTTCATCCTCAAATGCCTACGATGAACAGTTGAGGAAATTGGTAGGGGCAGGAAAAGACACAGAGGGTGCCTATTGGGAATTAGTAGTGAAAGACATACATGATACTTGCAAAATCTTGGAGCCAATTTACAATAATTCAGAAGGGGTAGATGGATATGTATCTGTTGCAGTTTCCCCCAAGCTAGCAAATGATACCAAGGGGACAATTGAAGAGGCAAAATGGCTTCATAAGATGATTGGGTGTTCAAATGTTTACATTAAAATTCCCGCAACTGATGAATCCATTCTTTCTATGAAGGAGGTTATTTCTCTGGGGATAAGTGTAAATGCCACACTCATATTTTGCCTCCCTAGATATGAAGCAGTGATTGATGCTTACTTGGATGGCCTTGAGGCTTGTGGGAGAACTGATCTCTCCAAGGGTGCAATTGCTCAAGCAGTCTTAGCTTACCAACTTTATCAGAAAAAGTTTTCTGGTCCAAGATGGGAACAATTGGAGAAGAGAGGTGCCAAGAAGCAGAGGTTAATGTGGGCTTCAACAAATGTGAAAAATCCAGCTTACCCTCACACATTTTATGTTGATTCTCTTATTGGACCTGATACGATTTCAACGATGCCAGAGCAAGCTCTCAAAGCCTTCATGGAGCATGGCATTCTTTCAAGAACTCTTGATGCCGAAGTATCAGAGGCTGAACACATTTACAATGCAATTCAGAAGTTGGGGATTCATTGGCCTTCTATTGGAACACAACTCGAACTTCAGGTGCTGGATTCCTTCACAAAAAGCTTTGATAATGTGCTCAATTGCATTCACAACAAAACACTTGTACAAGTCTGA 1326 0.4133 MHIPLKNSHGNGFNHCFFQCKLQAFSLRKHGFRVDPLGSLLPQLINITFHSHPYLHLLLLLLLLNKAALARLHHIHILSLVLFSFSFPSIAFSTLSLHCLGGTMEHNSNRTNIKSTILHHLFQKERQSPYYDNLCRPVSDLLPFIDNGIRGVTTNPAIFERAISSSNAYDEQLRKLVGAGKDTEGAYWELVVKDIHDTCKILEPIYNNSEGVDGYVSVAVSPKLANDTKGTIEEAKWLHKMIGCSNVYIKIPATDESILSMKEVISLGISVNATLIFCLPRYEAVIDAYLDGLEACGRTDLSKGAIAQAVLAYQLYQKKFSGPRWEQLEKRGAKKQRLMWASTNVKNPAYPHTFYVDSLIGPDTISTMPEQALKAFMEHGILSRTLDAEVSEAEHIYNAIQKLGIHWPSIGTQLELQVLDSFTKSFDNVLNCIHNKTLVQV 441
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu11g04291 441 Hamap Transaldolase [tal]. 127 441 IPR004732 GO:0004801|GO:0005737|GO:0006098
Vimu11g04291 441 Pfam Transaldolase/Fructose-6-phosphate aldolase 145 431 IPR001585 GO:0005975
Vimu11g04291 441 ProSitePatterns Transaldolase signature 1. 151 159 IPR018225 GO:0005975
Vimu11g04291 441 Gene3D Aldolase class I 115 433 IPR013785 -
Vimu11g04291 441 PANTHER TRANSALDOLASE 303 436 IPR001585 GO:0005975
Vimu11g04291 441 CDD Transaldolase_like 128 427 IPR004732 GO:0004801|GO:0005737|GO:0006098
Vimu11g04291 441 SUPERFAMILY Aldolase 129 436 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu11g04291 Vimu-Chr11 64275301 64277859 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu11g04291 K00616 - gmx:100811673 543.888
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu11g04291 11 64275301 64277859 Vimu11g04291 11 64275301 64277859 ECH