Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu11g04277 ATGAGGTTTTATGGTTGCAGAAATTTCCCGAAAGTTCTGGTGGATGGGCCATACGGGGCTCCGGCACAGGACTACAGGGAGTACGAGGTGGTTCTGCTGGTGGGGCTAGGAATAGGGGCTACCCCAATGATAAGCATTCTGAAGGACATGGTGAAGAGGTTGAAGGGGATAGAGGAGGAGGAAGTGGAGGAGGGAGCGGTGGCGAAGAACGGCGATGATGAGTTCAAGACAAGGAGAGCATACTTCTACTGGGTGACGAGAGAGCAGGGTTCCTTCGACTGGTTCAAAGGGGTGATGAACGAGGTAGCCGAAGAAGATCGAAGGAAGGTGATAGAGCTCCACAGCTACTGCACCAGCGTCTACGAAGAAGGTGATGCTCGCTCTGCTCTCATTGCCATGTTGCAGTCCATCAACCATGCGAAGAATGGCCTTGACATTGTCTCTGGAACTCGCGTCATGTCTCACTTTGCCAAACCCAATTGGCGCACAGTTTACAAACGCATAGCCCTTAATCATCCACATGCTCGTGTTGGGGTGTTTTACTGTGGGCCATCAGCTCTCACCCATGAGCTTCGTCAGCTGGCGTTGGATTTCTCTCACAACACATCCACCAAGTATGATTTCCACAAAGAAAATTTCTGA 642 0.5109 MRFYGCRNFPKVLVDGPYGAPAQDYREYEVVLLVGLGIGATPMISILKDMVKRLKGIEEEEVEEGAVAKNGDDEFKTRRAYFYWVTREQGSFDWFKGVMNEVAEEDRRKVIELHSYCTSVYEEGDARSALIAMLQSINHAKNGLDIVSGTRVMSHFAKPNWRTVYKRIALNHPHARVGVFYCGPSALTHELRQLALDFSHNTSTKYDFHKENF 213
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu11g04277 213 FunFam Respiratory burst oxidase protein A 19 213 - -
Vimu11g04277 213 SUPERFAMILY Ferredoxin reductase-like, C-terminal NADP-linked domain 26 213 IPR039261 -
Vimu11g04277 213 PRINTS Cytochrome B-245 heavy chain signature 10 23 IPR000778 GO:0016020|GO:0016491
Vimu11g04277 213 PRINTS Cytochrome B-245 heavy chain signature 33 50 IPR000778 GO:0016020|GO:0016491
Vimu11g04277 213 Gene3D - 19 213 IPR039261 -
Vimu11g04277 213 PANTHER NADPH OXIDASE 11 213 - -
Vimu11g04277 213 Pfam Ferric reductase NAD binding domain 28 195 IPR013121 GO:0016491
Vimu11g04277 213 CDD NOX_Duox_like_FAD_NADP 10 213 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu11g04277 Vimu-Chr11 64175806 64181106 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu11g04277 8 213 Miscellaneous Gene Families AT5G51060 72.986 1.47e-109 332
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu11g04277 K13447 - gmx:100808271 371.703
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu11g04277 11 64175806 64181106 Vimu11g04277 11 64175806 64181106 ECH