Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu11g04189 ATGCGCATAATTCACTTCAGTTATGGTTTCAGAGATTCCTTATTTTGGTTCTTAACTCAAAAAACAACTATGGCGGGTGCATGCAGCAGAGCACCCATTTCCCATCTTCCTCTGCGGAACCCCAAAACCAGAATCTATAATTCTCAGAGCAGAGTTCTTCAACTTCAAAATAGGCGTTTGTTCCTCTTCTCTCTGCCCCTGTCTAGTTTCGTTCTCCTTCCCGTTCCCAGCTTTGGTGATGGTAACGGTGCAATTGATAAATTTCAACATGGGTCTTCTTCCTCATACGCTGCCACAATGTATGACCCTCTGAGTGCTGCTGAAAGAGAAGCAAGTGCTTTAGTTTCACAGAGAGTCTCTCAAGCAGTGGATTTGTTGGAGAAAGGGAGGGAATTGCAGGCTCAGGGAGACTTCACTGCTGCTCTTGGTTACTTTTCTCAGGTTGTTGAAAGCTACAAAGACTTGGCATTCTCAGAGTATGCAAGGGTAGGAAGAGCATTGGCCCTGTATGAAGTTGGTGACAGAGAAGAAGCAATTGCAGAGATGGAGGACGTTTCAATATCTCTAAAAGGATATCCAGAAATACATGCAGCTCTTGCGGCAGCCTTATATGCAGATAAACACGCCGCATTGCTTGCTGAAAACCAGTTTGCCATTGCAACTCTTCTTGATCCCCATTTTACAGACATTTCATATGTTAGAGACACAAAGCACTGGCCTCCAAGTTTGATCAGTTCTCTGCAGCACTTCATCACACTGTCTTAA 765 0.4431 MRIIHFSYGFRDSLFWFLTQKTTMAGACSRAPISHLPLRNPKTRIYNSQSRVLQLQNRRLFLFSLPLSSFVLLPVPSFGDGNGAIDKFQHGSSSSYAATMYDPLSAAEREASALVSQRVSQAVDLLEKGRELQAQGDFTAALGYFSQVVESYKDLAFSEYARVGRALALYEVGDREEAIAEMEDVSISLKGYPEIHAALAAALYADKHAALLAENQFAIATLLDPHFTDISYVRDTKHWPPSLISSLQHFITLS 254
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu11g04189 254 Gene3D Tetratricopeptide repeat domain 112 234 IPR011990 GO:0005515
Vimu11g04189 254 Pfam Tetratricopeptide repeat 134 201 - -
Vimu11g04189 254 PANTHER EXPRESSED PROTEIN 35 254 - -
Vimu11g04189 254 SUPERFAMILY TPR-like 116 230 IPR011990 GO:0005515
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu11g04189 - - var:108334734 459.144
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu11g04189 11 63458143 63460848 Vimu11g04189 11 63458143 63460848 ECH