Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu11g04177 ATGTTGAAAGTGGTTGGAGACGAAGTGAAGAACAGTAAAACGAAAATTGCAGAGATAGATGAAATGCATCTGGAGATCATCCAAGCTGCATCTCTTCTTGCATATAGTTGCATACGTAAACCACGTCACATTGTTAAATCAGAGAAACGTAAAGATACTCAGGTAAGTGTTTCAAACAAAGAAGAAACAAGGTTTCATCATGAATCGGAATCGGAATCGGAATCATCCTTTGAGAAGGTGGTGGAGATGGGAGTGCCGTGTAACGAATGCGTTCAAGAAAAACTGCGATGGATAAGGTCTCAGATCATCGGTAACGGTGCAGAGTTTGATTCTCCGTTTGGAAGACGAATCGTTGTGTATGCTGATCACACCGCTTCTGCTCGCAGTCTTCGCTACAATGAAAACTTCATCGCCAATCATCTTCTTCCTTTCTACGGCAACACTCACACGTGCGACAGTTACGTGGGAAGCAGGACAACAAAGATGGTACAGGAAGCAAGAGAGTACATTAAAAAATGCTTAGGTGGTCGGAAAGACGATGCACTCATCTTGTGTGGCTCTGGCTCAACTGCAGCCATCAAGAGGCTGCAAGAAGTGATGGGAATTGCAGTACCCTCTATCTTGAGGGAAAGGGTTTTGAAGAGCCTTAGCACGGAAGAAAGATGGGTGGTTTTTGTTGGACCTCATGAACACCATTCCAACCTCCTTTCTTGGAGGCAAAGTTTGGCTGAGGTGGTAGAAATTGGTCTTGATCACCAAGGCTTGATAAACATGGATGCTCTAAAGCTAAAACTTGAGGCCTACAAAGACACCAATCGACCCATGTTGGGATCTTTCTCAGCCTGTAGCAATGTCACCGGAATCTACTCAGATACACGAGCAATTGCTCAGCTTCTTCATCAATACAAAGCCTTTGCATCCTTTGATTTTGCAGCGAGGTCTGGGGAGAGTGATGGGTATGACGCAGTGTTCCTGAGTCCACACAAGTTTCTTGGTGGTCCTGACTCTCCTGGGATTCTGCTTATGAACGATGCTCTCTACCGATTAAGATCTTCGCCGCCATCAACTTGTGGAGGTGGAACTGTGGATTACGTCAACGGCTTCAACAAAAAGGATACACTGTACTTGGAGAACATAGAGGAAAGAGAAAATGGAGGCACTCCTCCTATAATCCAGACAGTGAGAGCAGCGTTGGCATTTTGGGTGAAAGAGTACATAACCTACAAAGAGATTGAGAAACGTGAACAAGTTTACATTAAGAAAGCACTTAAGAGACTAATGTCCAACCCAAACATTGAGGTTCTTGGAAACTTGAGAACCAAAAGACAAGCCATACTGTCATTTATCATTTATTCTACCACCAACAAAAGCTGTGTATCACCTGGTTGGGGCATTAAATGGCTAGAAGACAGCCAGAAACAGGAAAAACAAAGAGAACTTAACTTTTTGAAAGAGACAGAGAGCGAAAGAGGTAAGCTACTTCATGGCCCTTTTGTTGCAACACTGCTAAATGACCTATTTGGCATCCAAGCCCGTGGAGGGTGTGCTTGTGCTGGACCTTATGGTCACCAATTGCTCAATATCAACAAAGCTCAATCTCTTGCTATTAGATCAGCAATTCAAGAGGGTTATGTTGGAGTAAAACCTGGGTGGAGTAGAGTCAGTTTTCCGTATTACATGGAGGCGGAGGAATTTGAGTTCATTTTAACTGCAATAGAGTTTGTAGCAAACTATGGCCAACGATTCCTTCCCTTGTATAGCTTCAATCTGAGAAACGGCAGTTGGAGAATGAAGAAAGACAAACTTCAGGCTGTGATAAACCAAAATAACTGCAACTTTCGGAAGGAAGCAAATGATTTGAAACCACTGAAAGCAGGTGTTGGATATAACGTTGGAACCAAACAAGTTAATGTATTAAGGAAATCATACTTAGATACAGCAAAATATATTGCAAGTCTTCTCCCCAAGTTCCCTTATGAGGCATTACTCCAAGAAGATGTAGATCCTAATGTTCTCTATTTTAGACTTTAA 2031 0.4274 MLKVVGDEVKNSKTKIAEIDEMHLEIIQAASLLAYSCIRKPRHIVKSEKRKDTQVSVSNKEETRFHHESESESESSFEKVVEMGVPCNECVQEKLRWIRSQIIGNGAEFDSPFGRRIVVYADHTASARSLRYNENFIANHLLPFYGNTHTCDSYVGSRTTKMVQEAREYIKKCLGGRKDDALILCGSGSTAAIKRLQEVMGIAVPSILRERVLKSLSTEERWVVFVGPHEHHSNLLSWRQSLAEVVEIGLDHQGLINMDALKLKLEAYKDTNRPMLGSFSACSNVTGIYSDTRAIAQLLHQYKAFASFDFAARSGESDGYDAVFLSPHKFLGGPDSPGILLMNDALYRLRSSPPSTCGGGTVDYVNGFNKKDTLYLENIEERENGGTPPIIQTVRAALAFWVKEYITYKEIEKREQVYIKKALKRLMSNPNIEVLGNLRTKRQAILSFIIYSTTNKSCVSPGWGIKWLEDSQKQEKQRELNFLKETESERGKLLHGPFVATLLNDLFGIQARGGCACAGPYGHQLLNINKAQSLAIRSAIQEGYVGVKPGWSRVSFPYYMEAEEFEFILTAIEFVANYGQRFLPLYSFNLRNGSWRMKKDKLQAVINQNNCNFRKEANDLKPLKAGVGYNVGTKQVNVLRKSYLDTAKYIASLLPKFPYEALLQEDVDPNVLYFRL 676
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu11g04177 676 Pfam Aminotransferase class-V 119 451 IPR000192 -
Vimu11g04177 676 Gene3D Aspartate Aminotransferase, domain 1 382 580 IPR015422 GO:0003824
Vimu11g04177 676 PANTHER CYSTEINE DESULFURASE 70 581 - -
Vimu11g04177 676 Gene3D - 137 360 IPR015421 GO:0003824
Vimu11g04177 676 MobiDBLite consensus disorder prediction 48 73 - -
Vimu11g04177 676 SUPERFAMILY PLP-dependent transferases 118 573 IPR015424 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu11g04177 Vimu-Chr11 63358217 63363377 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu11g04177 - - var:108325539 1231.08
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu11g04177 11 63358217 63363377 Vimu11g04177 11 63358217 63363377 ECH