Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu11g04165 ATGGCAAGTTTAGAGGAAGATGAGTTGGTACAAATGGTGCAAGATTTTATAGAATCAGAATCAACATCCTCCACAACTTCCACTTCCTCAAATTGCCACACCTTAACCCACAGAACCCAATTTTTTATTCTGCAGGATATTCTAAGAAGTGAGGGTGATGCAGCACCTGAGACTAAGGTGTTGAAGTGTGTACTGAAACATATGAGAGGTAGAAAAGGTGCAGAGAAAACAACCAATCTCAGTAGATGGCTTGCTGTGAGGATGAAAATGGATGGTCTTGATGCTTCTATATGTCACACATCTTGGGCCACCTCTCTGGGTTGTCCTGCAGGTGAATACGAGTATATTGAGGTGATGGTGGAGGATGAGGATTATAGTAAGCCTTTGAGGGTGATAGTAGATATAGATTTCAGGTCCCAATTTGAAGTTGCGAAGCCTACGGAAGAGTACAAAGAATTGACAGAATCGGTTCCTTACATTTTTGTTGGGAGTGAGAAGAAGCTGTGCAAGATAATTTCCTTGCTATGTTCTGCTGCGAAACAGTGTCTAAGAGAGAAGGGTCTTCACGTGCCTCCATGGAGAAGCGCATCGTACATGAAAGCCAAGTGGGTTTGTGTGAGTCGTAAAGAAGGATCAAAGGGTGATGAAGATAGTGATGTTATTGGTAACTGGGTACCTCCATTGTTGAAACCAAAGAGAAGAGATTTGGGTGGTGGATCTAGTTTGTCGAATCAATTATCTAACATGAGTAGTGTAAATTATTGTTGCTAG 771 0.4189 MASLEEDELVQMVQDFIESESTSSTTSTSSNCHTLTHRTQFFILQDILRSEGDAAPETKVLKCVLKHMRGRKGAEKTTNLSRWLAVRMKMDGLDASICHTSWATSLGCPAGEYEYIEVMVEDEDYSKPLRVIVDIDFRSQFEVAKPTEEYKELTESVPYIFVGSEKKLCKIISLLCSAAKQCLREKGLHVPPWRSASYMKAKWVCVSRKEGSKGDEDSDVIGNWVPPLLKPKRRDLGGGSSLSNQLSNMSSVNYCC 256
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu11g04165 256 Pfam PDDEXK-like family of unknown function 12 205 IPR006502 -
Vimu11g04165 256 PANTHER OS03G0796600 PROTEIN 6 213 IPR006502 -
Vimu11g04165 256 NCBIfam uncharacterized plant-specific domain TIGR01615 85 206 IPR006502 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu11g04165 Vimu-Chr11 63235095 63236163 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu11g04165 - - gmx:100782815 384.415
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu11g04165 11 63235095 63236163 Vimu11g04165 11 63235095 63236163 ECH