Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu11g04163 ATGTTGGCCACTGTCATGAATGCTATATTTCTTCAAGCAACAATGGAGAGTATTGGCATTCCTACTCGGGTGCAGACTGCATTTCGTATGTCTGAGGTTGCAGAACCATATATACGCAGAAGGGCTGTGAGGCATTTGGAAAAAGGAAGGGTTGTTATTTTTGCTGCCGGAACTGGAAATCCATTTTTTACCACAGACACTGCTGCAGCACTCCGATGTGCAGAGATTAATGCAGAGGTTGTACTCAAAGCAACAAACGTTGATGGAGTTTATGACGACGACCCAAAGCGTAATCCACAAGCACGTCTTCATGACACACTAACATATCAAGAGGTAACTTCAAGAGATCTGTCAGTGATGGACATGACTGCCATAACTTTATGCCAGGAAAATAATATTCCAGTTGTTGTCTTCAATCTAAATAAACCTGGCAACATTGAGAAAGCTATTAAAGGAGAGCGAGTTGGCACTTTGATTGGGGCAAACTGGAATTCTACCGTATACGAACATGAAAATATATGA 522 0.4176 MLATVMNAIFLQATMESIGIPTRVQTAFRMSEVAEPYIRRRAVRHLEKGRVVIFAAGTGNPFFTTDTAAALRCAEINAEVVLKATNVDGVYDDDPKRNPQARLHDTLTYQEVTSRDLSVMDMTAITLCQENNIPVVVFNLNKPGNIEKAIKGERVGTLIGANWNSTVYEHENI 173
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu11g04163 173 SUPERFAMILY Carbamate kinase-like 1 159 IPR036393 -
Vimu11g04163 173 FunFam Uridylate kinase 1 162 - -
Vimu11g04163 173 CDD AAK_UMPK-PyrH-Ec 1 160 IPR015963 GO:0005737|GO:0006221|GO:0033862
Vimu11g04163 173 Pfam Amino acid kinase family 2 139 IPR001048 -
Vimu11g04163 173 Gene3D - 1 170 IPR036393 -
Vimu11g04163 173 PANTHER URIDYLATE KINASE 1 163 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu11g04163 Vimu-Chr11 63223894 63227526 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu11g04163 K09903 - gmx:100781745 323.168
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu11g04163 11 63223894 63227526 Vimu11g04163 11 63223894 63227526 ECH