Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu11g04149 ATGGCTTCCTCTCATGGTAATGCACACTCTGATGCTGCAAAGATGGAACAGATAATCACTGAGTTTTTTGCCAAGAGTCTTCATATAATACTCGAATCAAGGGCACCCTATGTGTCCTCTCGCAATTTCTACGGTGATCAAGCTGCTTTGTCTCCATGTTCATCGTCTTCATCTTCGTCCAGTGTGCGGCCGAGGGATAAGTGGTTCAATTTGGCGCTTCGGGAGTGCCCGGCGGCGTTGGAAAACATTGACATCTGGCGCCAGAGCAACATTGAGTGCATAGTGATTGATGTGATTTTAGTGCAGAGACCTCTGGATTGGGACCCTGTGACTGCGAGTCTCTCTCCAAGAAGGGTTCTCCCCAGGAGTTCTTCGCTGAAGGAAAGATGCCCTTTTGGCTGGAACACTGATCAGGAAGAATTGGGGGTTGGGGGAAGGAGTGAAAAGATTGTGGAGAGGTGGGTTGTGCAGTATGAAAGTAGGAAGACAAGGGATTCTAGTTCTTGCAGTAGGAGGTCAAGCAGTGTTTCTTTGCATAACTCGTATAAGAAATCAACTTTGCTTTTAAGGTCTTTGTATTCCACTCTTAGACTTTTACCTGCCTATAAAGTATTCAGAGAGCTTAATTCTTCTGGACAAATAAGGGATTTTACCCTTGCTCATCGTGTGTCTTCTTTTGTTGAGCCCTTCACCCGGAAAGAAGAGGCTGAAATGATGAAATTCGGGTTCACCCCTGTGGATACTTCTTCTGGTAGGCTGTGTCTTAGTGTGATGTATTGCCCCGTGGTCTCAGGTGTGAGCTCAGAACCTTCGACTCCAATGTCCCCACAAGTTATAACAGACTATGTTGGGAGTCCATTGGCTGATCCGTGGAGAAGGTTTCCTTCTCTTCCTGTTGCAGGCTTGCCATTTCATGGCTCTCCATCATCGTTGCCATCTTCAAGGCAGCAGCGCAGTTTGAGTTTCGATCATTATAGAGCCTCACCTCCATCTTATTTACCCTCCCCTACTTATTCAGAATCACTCTCTTCAGTGTATAATGCAAGTTTGCGGCGTTTCCCCCCTGCAAGTTTGCCTCCTCATCCAACTGAGATGTCTTTGATTCAAAAGAAGAATACAAATTTTGATGATTATTATCACTCTCGATCACCTTCAACCGATAATTCAGGACCATTACCATGCAAACCACTTTTACGATCTGGAAGTGCTCCTGTCAGCATACCTGCTGAAGTTGCTAATTTTCCTGGTTATTCCAATAGGCATAATGTGCCTCCGTCTCCTCCCCTAAGAGGTTCAAGGGGCACTGCTAAGATTGGTAGATGTACAAATGCTATGCAAACTGGTGCAACAGCTGAGAAGCTGTTTTCTCTTGGAAAAGATGAGTCTCGAAAATATTCTGGAGTCAAGATATCGTCTAACAGTTCGCCCTCCAGTAGGTCTTATCAGGATGATTTTGATGATACTGATTTTACTTGTCCGTTTGATGTGGATGATGATGATATTACGGATCCAGGAAGCAGAGCTGAATCTCTGGATCATGGTCTTTTGGCTGAGACATTTGAAGGTGGAGGATTCTTTCCCATTAGAAAGTCTCATGATGCTGCTGTTGGTGCGCTTGTACAAATGCTGAAGAAAGCACCACCTCTCCGTCAAGATTTCTCCACTTCACAGCACCTGTCACAAGGAGTTACAAATCCTGAAACCTGGAACAACAACATTGGAAGGCCCAGTGAGATCCTGGAGGCATCAAAACAAGTGAGCATGATGTCTTCTGGGATCATAGCCACCAGAAAAACCACAGCTGATGCACTAGAAGAGTTCCAAGGTTACAAAGAGATGAAAAACCTGTTGCTTATGCGAGATAGTCTGAGCTGGCTAGTAGAGTACAGCCTTGTATTTCTGTCAGATACTTGA 1914 0.4509 MASSHGNAHSDAAKMEQIITEFFAKSLHIILESRAPYVSSRNFYGDQAALSPCSSSSSSSSVRPRDKWFNLALRECPAALENIDIWRQSNIECIVIDVILVQRPLDWDPVTASLSPRRVLPRSSSLKERCPFGWNTDQEELGVGGRSEKIVERWVVQYESRKTRDSSSCSRRSSSVSLHNSYKKSTLLLRSLYSTLRLLPAYKVFRELNSSGQIRDFTLAHRVSSFVEPFTRKEEAEMMKFGFTPVDTSSGRLCLSVMYCPVVSGVSSEPSTPMSPQVITDYVGSPLADPWRRFPSLPVAGLPFHGSPSSLPSSRQQRSLSFDHYRASPPSYLPSPTYSESLSSVYNASLRRFPPASLPPHPTEMSLIQKKNTNFDDYYHSRSPSTDNSGPLPCKPLLRSGSAPVSIPAEVANFPGYSNRHNVPPSPPLRGSRGTAKIGRCTNAMQTGATAEKLFSLGKDESRKYSGVKISSNSSPSSRSYQDDFDDTDFTCPFDVDDDDITDPGSRAESLDHGLLAETFEGGGFFPIRKSHDAAVGALVQMLKKAPPLRQDFSTSQHLSQGVTNPETWNNNIGRPSEILEASKQVSMMSSGIIATRKTTADALEEFQGYKEMKNLLLMRDSLSWLVEYSLVFLSDT 637
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu11g04149 637 MobiDBLite consensus disorder prediction 465 486 - -
Vimu11g04149 637 Pfam Autophagy-related protein 13 19 259 IPR018731 GO:0006914|GO:1990316
Vimu11g04149 637 Gene3D HORMA domain 11 264 IPR036570 -
Vimu11g04149 637 PANTHER UNCHARACTERIZED 3 620 IPR040182 GO:0000045
Vimu11g04149 637 MobiDBLite consensus disorder prediction 467 481 - -
Vimu11g04149 637 FunFam Autophagy-related protein 13b 13 265 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu11g04149 Vimu-Chr11 63110198 63115803 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu11g04149 K08331 - gmx:100798585 923.309
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu11g04149 11 63110198 63115803 Vimu11g04149 11 63110198 63115803 ECH