Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu11g04049 ATGCGCTACGTGAAACTGCACACAACCATCCATCATCTTCTTCCTCTTCTTTTTCTGAGAGAGTTTTTCTTTCTACCTTTGAAAGTAAGAAAAATGTTCATCCAGAATTTTAAGGTGGAGAGTCCCAACGTGAAGTACACAGAGAGTGAGATTGAGTCTGTGTACAATTACGAAACCACTGAACTTGTTCACGAGAACAAGAATGGCAGTTATCAGTGGGTTGTGAAGCCCAAAACTGTGAAATATGAATTTAAAACAAACACTGATGTGCCTAAACTAGGGGTAATGCTTGTTGGTTGGGGTGGAAACAATGGCTCAACGCTCACCGGTGGTGTTATTGCTAACAGAGAGGGTATTTCATGGGCAACAAAGGACAAGATTCAACAGGCCAATTACTTTGGGTCACTGACCCAGGCATCAGCTATCAGAGTAGGGTCTTTCCAAGGAGAGGAAATATATGCTCCTTTCAAGAGTCTGCTTCCAATGGTAAACCCTGATGATATTGTGTTCGGGGGATGGGATATCAGCAACTTGAACCTGGCTGATGCCATGGCCAGGGCCAAGGTGTTTGACATCGACCTGCAGAAACAGTTGAGGCCTTACATGGAATCCATGATTCCACTCCCTGGAATCTTTGACCCCGATTTCATTGCTGCCAACCAAGGAGACCGTGCCAACAACGTCATCAAGGGCACAAAGAAAGAACAAGTTCAACAAATCATCAAAGACATTAAGGAGTTTAAGGAAAAGAGCAAGGTTGACAAGGTGGTTGTGCTCTGGACAGCCAACACAGAGAGGTACAGCAACGTAGTTGTGGGATTAAACGACACCGAGGAAAACCTCTTGGCTTCCTTGGACAGGAACGAGGCTGAGATTTCCCCTTCCACCTTGTATGCCATTGCTTGTGTCATGGAAAATGTTCCCTTCATAAATGGAAGCCCTCAGAACACCTTTGTCCCAGGGTTGATTGATCTGGCCATCAGGAGGAACAGTTTGATTGGAGGAGATGACTTTAAGAGTGGTCAGACCAAAATGAAATCCGTGTTGGTGGATTTTCTTGTAGGGGCAGGCATCAAGCCAACATCAATAGTGAGTTACAACCATCTGGGAAACAATGATGGTATGAATCTTTCAGCCCCTCAAACCTTCCGCTCTAAGGAAATTTCCAAGAGCAATGTTGTTGACGACATGGTTAACAGCAACGCCATCCTCTATGAACCTGGAGAACATCCTGACCATGTTGTTGTTATTAAGTATGTGCCTTACGTTGCGGATAGCAAAAGGGCGATGGATGAGTACACTTCAGAGATATTCATGGGTGGAAAGAACACAATAGTGTTACACAACACCTGTGAGGATTCACTGTTAGCTGCTCCTATTATCTTGGACCTGGTTCTTCTTGCTGAGCTCAGCACTCGAATCCAGTTTAAAGCTGAAAATGAGGGCAAGTTTCATTCGTTCCACCCCGTTGCCACCATCCTCAGTTACTTGACCAAGGCCCCTCTTGTTCCACCTGGTACCCCAGTGGTGAATGCATTATCAAAGCAGAGAGCTATGCTGGAAAATATCATGAGGGCTTGTGTTGGATTAGCTCCCGAGAACAACATGATCCTGGAGTACAAGTAG 1626 0.4514 MRYVKLHTTIHHLLPLLFLREFFFLPLKVRKMFIQNFKVESPNVKYTESEIESVYNYETTELVHENKNGSYQWVVKPKTVKYEFKTNTDVPKLGVMLVGWGGNNGSTLTGGVIANREGISWATKDKIQQANYFGSLTQASAIRVGSFQGEEIYAPFKSLLPMVNPDDIVFGGWDISNLNLADAMARAKVFDIDLQKQLRPYMESMIPLPGIFDPDFIAANQGDRANNVIKGTKKEQVQQIIKDIKEFKEKSKVDKVVVLWTANTERYSNVVVGLNDTEENLLASLDRNEAEISPSTLYAIACVMENVPFINGSPQNTFVPGLIDLAIRRNSLIGGDDFKSGQTKMKSVLVDFLVGAGIKPTSIVSYNHLGNNDGMNLSAPQTFRSKEISKSNVVDDMVNSNAILYEPGEHPDHVVVIKYVPYVADSKRAMDEYTSEIFMGGKNTIVLHNTCEDSLLAAPIILDLVLLAELSTRIQFKAENEGKFHSFHPVATILSYLTKAPLVPPGTPVVNALSKQRAMLENIMRACVGLAPENNMILEYK 541
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu11g04049 541 Pfam Myo-inositol-1-phosphate synthase 93 525 IPR002587 GO:0004512|GO:0006021|GO:0008654
Vimu11g04049 541 Gene3D - 412 541 - -
Vimu11g04049 541 Gene3D - 28 386 - -
Vimu11g04049 541 FunFam inositol-3-phosphate synthase 413 541 - -
Vimu11g04049 541 FunFam Inositol-3-phosphate synthase 1 32 387 - -
Vimu11g04049 541 FunFam Inositol 1-phosphate synthase 345 450 - -
Vimu11g04049 541 PANTHER MYO-INOSITOL-1 PHOSPHATE SYNTHASE 32 541 IPR002587 GO:0004512|GO:0006021|GO:0008654
Vimu11g04049 541 SUPERFAMILY Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain 340 453 - -
Vimu11g04049 541 Pfam Myo-inositol-1-phosphate synthase 341 454 IPR013021 -
Vimu11g04049 541 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 35 541 IPR036291 -
Vimu11g04049 541 PIRSF Myoinositol-ppht_synth 81 541 IPR002587 GO:0004512|GO:0006021|GO:0008654
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu11g04049 Vimu-Chr11 62309803 62314183 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu11g04049 K01858 - gmx:100800820 991.49
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu11g04049 11 62309803 62314183 Vimu11g04049 11 62309803 62314183 ECH
Vimu11g04049 11 62309803 62314183 Vimu6g01632 6 15058627 15061253 PCT