Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu11g03975 ATGTGGTGGATGATGGGCGAGGCTGGAGGGAATTACTCTTCTAAGAAGACCGATGATCTCTGCAGCAATGTTTGTGGCCAGGAATCGAGTCAAGTTTCAAGCATGTCAAGGATTCGTTGCATTCTGCGTGGTTTGGATGTTAAAACCTATATCTTCATGTTTGCCGTTGTCCCAATGTGCATCTTTGGATTCTATATACATGGGCAAAAGATCTCCTACTTTCTGAGGCCCCTATGGGAAAAAGCACCAAAGCCTTTCAATATCATCCCTCATTACTATAACGAAAATGTCACCATGGAGAATCTCTGCAGACTTCATGGCTGGGGAGTCCGGGAATATCCTAGACGTGTTTATGATGCTGTGTTGTTTAGTAATGAGTTGGAAATACTAACCTTGCGATGGAGAGAACTGTACCCTTACATAACTGATTTTGTTCTCCTTGAGTCAAATTCTACGTTTACCGGATTGCCCAAACCTCTGGTTTTCCAAAGCAATAGGGAGCAGTTCAAATTTATCGAGCCACGATTAACTTATGGTACTATTGGTGGGAGATTTAAGAAGGGAGAAAACCCATTTGTTGAGGAGGCATATCAGCGTGTAGCATTGGACCAGCTCCTCAAGATAGCCGGTATTAGTGATGATGACTTGTTGATTATGTCTGATGTGGATGAGATACCAAGCGCTCACACTATTAATCTCCTGAGGTGGTGTGATGAAGTACCCTCAATCCTTCATCTGCAGCTGAAAAACTATCTCTATTCATTTGAATTTCGCGTTGATGATAAGAGTTGGAGGGCTTCAATTCACAGGTATCAGACTGGGAAGACAAGGTATGCACATTATCGCCAATCTGATGACATGCTGGCCGACGCTGGCTGGCATTGTAGCTTTTGCTTCCGTCGCATCAGTGATTTCATTTTTAAAATGAAAGCCTATAGCCACTATGATAGAGTCAGATTCTCTCACTATTTAAATCCTGATAGAATTCAGAAGGTAATATGCAAAGGTGCTGATTTGTTTGATATGCTGCCGGAGGAGTACACTTTCAAGGATATCATTGGCAAAATGGGACCAATACCACATTCCTATTCTGCAGTTCATCTTCCTGCTTTTCTTCTGGAAAATGCTGAGAAGTATAAATTTCTTTTGCCTGGACATTGCAAAAGAGAAAGATGA 1176 0.4201 MWWMMGEAGGNYSSKKTDDLCSNVCGQESSQVSSMSRIRCILRGLDVKTYIFMFAVVPMCIFGFYIHGQKISYFLRPLWEKAPKPFNIIPHYYNENVTMENLCRLHGWGVREYPRRVYDAVLFSNELEILTLRWRELYPYITDFVLLESNSTFTGLPKPLVFQSNREQFKFIEPRLTYGTIGGRFKKGENPFVEEAYQRVALDQLLKIAGISDDDLLIMSDVDEIPSAHTINLLRWCDEVPSILHLQLKNYLYSFEFRVDDKSWRASIHRYQTGKTRYAHYRQSDDMLADAGWHCSFCFRRISDFIFKMKAYSHYDRVRFSHYLNPDRIQKVICKGADLFDMLPEEYTFKDIIGKMGPIPHSYSAVHLPAFLLENAEKYKFLLPGHCKRER 391
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu11g03975 391 PANTHER BETA-1,4-MANNOSYL-GLYCOPROTEIN BETA-1,4-N-ACETYLGLUCOSAMINYL-TRANSFERASE 34 390 IPR006813 GO:0003830|GO:0006487|GO:0016020
Vimu11g03975 391 Pfam Glycosyltransferase family 17 45 390 IPR006813 GO:0003830|GO:0006487|GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu11g03975 Vimu-Chr11 61569366 61571264 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu11g03975 1 390 Glycosyltransferase AT1G12990 79.487 0.0 680
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu11g03975 K00737 - gmx:100787062 789.26
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu11g03975 11 61569366 61571264 Vimu11g03975 11 61569366 61571264 ECH
Vimu11g03975 11 61569366 61571264 Vimu6g01588 6 14710753 14711829 PCT